RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W PET494P07390 489 aaPredicted RBP2.38□□□□□ -2.03
SHR3YDL212W YSR3P23501 404 aa2.38□□□□□ -2.03
SHR3YDL212W RIB7P33312 244 aa2.38□□□□□ -2.03
SHR3YDL212W TDA11P38854 504 aa2.38□□□□□ -2.03
SHR3YDL212W IBA57P47158 497 aa2.38□□□□□ -2.03
SHR3YDL212W LSB1P53281 241 aa2.38□□□□□ -2.03
SHR3YDL212W SPP2Q02521 185 aa2.38□□□□□ -2.03
SHR3YDL212W TVP15Q03860 143 aa2.38□□□□□ -2.03
SHR3YDL212W VBA1Q04301 562 aa2.38□□□□□ -2.03
SHR3YDL212W RRP36Q12481 300 aaPredicted RBP2.38□□□□□ -2.03
SHR3YDL212W AGC1Q12482 902 aa2.38□□□□□ -2.03
SHR3YDL212W OST3P48439 350 aa2.37□□□□□ -2.03
SHR3YDL212W CPD1P53314 239 aa2.37□□□□□ -2.03
SHR3YDL212W SWT21P53873 357 aaPredicted RBP2.37□□□□□ -2.03
SHR3YDL212W CDC14Q00684 551 aa2.37□□□□□ -2.03
SHR3YDL212W LOA1Q06508 300 aa2.37□□□□□ -2.03
SHR3YDL212W BEM2P39960 2167 aaKnown RBP2.36□□□□□ -2.03
SHR3YDL212W SEN34P39707 275 aa2.36□□□□□ -2.03
SHR3YDL212W VPS60Q03390 229 aa2.36□□□□□ -2.03
SHR3YDL212W TAF9Q05027 157 aa2.36□□□□□ -2.03
SHR3YDL212W FCF1Q05498 189 aaPredicted RBP2.36□□□□□ -2.03
SHR3YDL212W CTS2Q06350 511 aa2.36□□□□□ -2.03
SHR3YDL212W RPS3P05750 240 aaKnown RBP2.35□□□□□ -2.03
SHR3YDL212W RCY1P39531 840 aa2.35□□□□□ -2.03
SHR3YDL212W MNN5P46982 586 aa2.35□□□□□ -2.03
SHR3YDL212W MRX5P47007 382 aa2.35□□□□□ -2.03
SHR3YDL212W PEX31P53203 462 aa2.35□□□□□ -2.03
SHR3YDL212W RSM27P53305 110 aa2.35□□□□□ -2.03
SHR3YDL212W ARV1Q06541 321 aa2.35□□□□□ -2.03
SHR3YDL212W PLB3Q08108 686 aa2.35□□□□□ -2.03
SHR3YDL212W INO80P53115 1489 aa2.34□□□□□ -2.03
SHR3YDL212W RPP0P05317 312 aaKnown RBP2.34□□□□□ -2.03
SHR3YDL212W POF1P25576 258 aa2.34□□□□□ -2.03
SHR3YDL212W COT1P32798 439 aa2.34□□□□□ -2.03
SHR3YDL212W YJR146WP47174 117 aa2.34□□□□□ -2.03
SHR3YDL212W TRM44Q02648 567 aaKnown RBP2.34□□□□□ -2.03
SHR3YDL212W YPL039WQ03080 316 aa2.34□□□□□ -2.03
SHR3YDL212W SFH1Q06168 426 aa2.34□□□□□ -2.03
SHR3YDL212W GMC2Q06201 188 aa2.34□□□□□ -2.03
SHR3YDL212W RDS3Q06835 107 aaPredicted RBP2.34□□□□□ -2.03
SHR3YDL212W YLL007CQ07799 665 aa2.34□□□□□ -2.03
SHR3YDL212W OSM1P21375 501 aaKnown RBP2.33□□□□□ -2.04
SHR3YDL212W COY1P34237 679 aa2.33□□□□□ -2.04
SHR3YDL212W MRPL37P36532 105 aa2.33□□□□□ -2.04
SHR3YDL212W POP8P38208 133 aa2.33□□□□□ -2.04
SHR3YDL212W SPL2P38839 148 aa2.33□□□□□ -2.04
SHR3YDL212W SUR2P38992 349 aa2.33□□□□□ -2.04
SHR3YDL212W COA1P40452 197 aa2.33□□□□□ -2.04
SHR3YDL212W SER33P40510 469 aa2.33□□□□□ -2.04
SHR3YDL212W EMC2P47133 292 aaKnown RBP2.33□□□□□ -2.04
SHR3YDL212W COG7P53195 279 aa2.33□□□□□ -2.04
SHR3YDL212W FMP41P53889 259 aaKnown RBP2.33□□□□□ -2.04
SHR3YDL212W SDC1Q03323 175 aa2.33□□□□□ -2.04
SHR3YDL212W VPS68Q12016 184 aa2.33□□□□□ -2.04
SHR3YDL212W SSK22P25390 1331 aaPredicted RBP2.33□□□□□ -2.04
SHR3YDL212W CAT2P32796 670 aaKnown RBP2.32□□□□□ -2.04
SHR3YDL212W KAP114P53067 1004 aa2.32□□□□□ -2.04
SHR3YDL212W SEC10Q06245 871 aa2.32□□□□□ -2.04
SHR3YDL212W YBL112CQ3E7Y4 105 aa2.32□□□□□ -2.04
SHR3YDL212W YAL064W-BO13512 126 aa2.31□□□□□ -2.04
SHR3YDL212W COX2P00410 251 aa2.31□□□□□ -2.04
SHR3YDL212W MET16P18408 261 aaPredicted RBP2.31□□□□□ -2.04
SHR3YDL212W PEX3P28795 441 aa2.31□□□□□ -2.04
SHR3YDL212W KRE6P32486 720 aa2.31□□□□□ -2.04
SHR3YDL212W CLB6P32943 380 aa2.31□□□□□ -2.04
SHR3YDL212W HSM3P38348 480 aa2.31□□□□□ -2.04
SHR3YDL212W PET100P38958 111 aa2.31□□□□□ -2.04
SHR3YDL212W NPT1P39683 429 aaKnown RBP2.31□□□□□ -2.04
SHR3YDL212W COX20Q04935 205 aa2.31□□□□□ -2.04
SHR3YDL212W KAP95Q06142 861 aaKnown RBP2.31□□□□□ -2.04
SHR3YDL212W YOS9Q99220 542 aa2.31□□□□□ -2.04
SHR3YDL212W YMR316C-AI2HB70 103 aa2.3□□□□□ -2.04
SHR3YDL212W RPL24AP04449 155 aaKnown RBP2.3□□□□□ -2.04
SHR3YDL212W RPL26AP05743 127 aaKnown RBP2.3□□□□□ -2.04
SHR3YDL212W PHO89P38361 574 aa2.3□□□□□ -2.04
SHR3YDL212W YGP1P38616 354 aaKnown RBP2.3□□□□□ -2.04
SHR3YDL212W RPE1P46969 238 aa2.3□□□□□ -2.04
SHR3YDL212W YJL118WP47022 219 aa2.3□□□□□ -2.04
SHR3YDL212W DSK2P48510 373 aa2.3□□□□□ -2.04
SHR3YDL212W RPL26BP53221 127 aaKnown RBP2.3□□□□□ -2.04
SHR3YDL212W MNT4P53745 580 aa2.3□□□□□ -2.04
SHR3YDL212W SWS2P53937 143 aa2.3□□□□□ -2.04
SHR3YDL212W YMR166CQ03829 368 aa2.3□□□□□ -2.04
SHR3YDL212W YOR268CQ08734 132 aa2.3□□□□□ -2.04
SHR3YDL212W NUP157P40064 1391 aaKnown RBP2.3□□□□□ -2.04
SHR3YDL212W DPM1P14020 267 aaKnown RBP2.29□□□□□ -2.04
SHR3YDL212W POL30P15873 258 aaKnown RBP2.29□□□□□ -2.04
SHR3YDL212W TOM40P23644 387 aaKnown RBP2.29□□□□□ -2.04
SHR3YDL212W ERG2P32352 222 aa2.29□□□□□ -2.04
SHR3YDL212W PRM9P39551 298 aa2.29□□□□□ -2.04
SHR3YDL212W YAR1P46683 200 aa2.29□□□□□ -2.04
SHR3YDL212W TAD2P47058 250 aa2.29□□□□□ -2.04
SHR3YDL212W NBP35P52920 328 aa2.29□□□□□ -2.04
SHR3YDL212W MPP6P53725 186 aaPredicted RBP2.29□□□□□ -2.04
SHR3YDL212W CGI121Q03705 181 aaKnown RBP2.29□□□□□ -2.04
SHR3YDL212W OST6Q03723 332 aa2.29□□□□□ -2.04
SHR3YDL212W YOL019WQ08157 551 aa2.29□□□□□ -2.04
SHR3YDL212W PER33Q12144 273 aa2.29□□□□□ -2.04
SHR3YDL212W AI5_BETAQ9ZZX0 354 aa2.29□□□□□ -2.04
SHR3YDL212W COS2P0CX12 379 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 158.5 ms