RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W PDR16P53860 351 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W YNL140CP53910 189 aa1.21□□□□□ -2.22
CDC36YDL165W SLM2P53955 656 aa1.21□□□□□ -2.22
CDC36YDL165W EFM6P53970 246 aa1.21□□□□□ -2.22
CDC36YDL165W HXT11P54862 567 aa1.21□□□□□ -2.22
CDC36YDL165W APS2Q00381 147 aa1.21□□□□□ -2.22
CDC36YDL165W PRP38Q00723 242 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W SED5Q01590 340 aa1.21□□□□□ -2.22
CDC36YDL165W TRM44Q02648 567 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W DIG2Q03373 323 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W YMR209CQ03648 457 aa1.21□□□□□ -2.22
CDC36YDL165W YDR387CQ04162 555 aa1.21□□□□□ -2.22
CDC36YDL165W URH1Q04179 340 aa1.21□□□□□ -2.22
CDC36YDL165W GMC1Q04399 608 aa1.21□□□□□ -2.22
CDC36YDL165W SDH7Q04401 133 aa1.21□□□□□ -2.22
CDC36YDL165W MYO5Q04439 1219 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W APC4Q04601 652 aa1.21□□□□□ -2.22
CDC36YDL165W GAL83Q04739 417 aa1.21□□□□□ -2.22
CDC36YDL165W ROY1Q04847 553 aa1.21□□□□□ -2.22
CDC36YDL165W TAF9Q05027 157 aa1.21□□□□□ -2.22
CDC36YDL165W MDM30Q05930 598 aa1.21□□□□□ -2.22
CDC36YDL165W YLR456WQ06199 204 aa1.21□□□□□ -2.22
CDC36YDL165W BER1Q06688 274 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W FDH1Q08911 376 aa1.21□□□□□ -2.22
CDC36YDL165W YPL199CQ08954 240 aa1.21□□□□□ -2.22
CDC36YDL165W FCF2Q12035 217 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W SPC3Q12133 184 aa1.21□□□□□ -2.22
CDC36YDL165W YOL107WQ12239 342 aa1.21□□□□□ -2.22
CDC36YDL165W TPO4Q12256 659 aa1.21□□□□□ -2.22
CDC36YDL165W YLR108CQ12259 485 aa1.21□□□□□ -2.22
CDC36YDL165W ATP14Q12349 124 aa1.21□□□□□ -2.22
CDC36YDL165W YOR012WQ12351 137 aa1.21□□□□□ -2.22
CDC36YDL165W DGK1Q12382 290 aa1.21□□□□□ -2.22
CDC36YDL165W DCP1Q12517 231 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W YLR099W-AQ3E798 87 aa1.21□□□□□ -2.22
CDC36YDL165W THO2P53552 1597 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W LYS2P07702 1392 aa1.21□□□□□ -2.22
CDC36YDL165W HSL1P34244 1518 aa1.2□□□□□ -2.22
CDC36YDL165W VPS15P22219 1454 aa1.2□□□□□ -2.22
CDC36YDL165W GEA2P39993 1459 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W MON2P48563 1636 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W COR1P07256 457 aa1.2□□□□□ -2.22
CDC36YDL165W SEC53P07283 254 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W SPS2P08459 502 aa1.2□□□□□ -2.22
CDC36YDL165W RPS28BP0C0X0 67 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W RPL31AP0C2H8 113 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W RPL31BP0C2H9 113 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W RPL1AP0CX43 217 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W RPL1BP0CX44 217 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W HAP3P13434 144 aa1.2□□□□□ -2.22
CDC36YDL165W CAP2P13517 287 aa1.2□□□□□ -2.22
CDC36YDL165W MDH1P17505 334 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
CDC36YDL165W SPO7P18410 259 aa1.2□□□□□ -2.22
CDC36YDL165W FUN14P18411 198 aa1.2□□□□□ -2.22
CDC36YDL165W ART10P18634 518 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W CPR2P23285 205 aa1.2□□□□□ -2.22
CDC36YDL165W MIR1P23641 311 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W PET18P25362 215 aa1.2□□□□□ -2.22
CDC36YDL165W ADH7P25377 361 aa1.2□□□□□ -2.22
CDC36YDL165W ADE1P27616 306 aa1.2□□□□□ -2.22
CDC36YDL165W ERG9P29704 444 aa1.2□□□□□ -2.22
CDC36YDL165W MDH3P32419 343 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
CDC36YDL165W SCM4P32564 187 aa1.2□□□□□ -2.22
CDC36YDL165W SRB6P32570 121 aa1.2□□□□□ -2.22
CDC36YDL165W SPS19P32573 292 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W NRP1P32770 719 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
CDC36YDL165W SKT5P34226 696 aa1.2□□□□□ -2.22
CDC36YDL165W CSG2P35206 410 aa1.2□□□□□ -2.22
CDC36YDL165W YKL075CP36083 450 aa1.2□□□□□ -2.22
CDC36YDL165W YKL071WP36086 256 aa1.2□□□□□ -2.22
CDC36YDL165W YKL070WP36087 169 aa1.2□□□□□ -2.22
CDC36YDL165W MRPL24P36525 258 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W YBR056WP38081 501 aa1.2□□□□□ -2.22
CDC36YDL165W BNA4P38169 460 aa1.2□□□□□ -2.22
CDC36YDL165W TCM62P38228 572 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W SLM4P38247 162 aa1.2□□□□□ -2.22
CDC36YDL165W VHC1P38329 1120 aa1.2□□□□□ -2.22
CDC36YDL165W EFM1P38732 585 aa1.2□□□□□ -2.22
CDC36YDL165W YHR122WP38829 231 aa1.2□□□□□ -2.22
CDC36YDL165W CHL4P38907 458 aa1.2□□□□□ -2.22
CDC36YDL165W MLH1P38920 769 aa1.2□□□□□ -2.22
CDC36YDL165W SRP14P38985 146 aa1.2□□□□□ -2.22
CDC36YDL165W SEO1P39709 593 aa1.2□□□□□ -2.22
CDC36YDL165W BDH1P39714 382 aa1.2□□□□□ -2.22
CDC36YDL165W RBG1P39729 369 aa1.2□□□□□ -2.22
CDC36YDL165W PTI1P39927 425 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W YER121WP40076 114 aa1.2□□□□□ -2.22
CDC36YDL165W PGD1P40356 397 aa1.2□□□□□ -2.22
CDC36YDL165W PAN6P40459 309 aa1.2□□□□□ -2.22
CDC36YDL165W LCB2P40970 561 aa1.2□□□□□ -2.22
CDC36YDL165W PHO86P46956 311 aa1.2□□□□□ -2.22
CDC36YDL165W PMT4P46971 762 aa1.2□□□□□ -2.22
CDC36YDL165W MNN5P46982 586 aa1.2□□□□□ -2.22
CDC36YDL165W ASG7P46993 209 aa1.2□□□□□ -2.22
CDC36YDL165W AIM23P47015 356 aa1.2□□□□□ -2.22
CDC36YDL165W ECM27P47144 725 aa1.2□□□□□ -2.22
CDC36YDL165W RPS12P48589 143 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W PHB2P50085 310 aa1.2□□□□□ -2.22
CDC36YDL165W UBC12P52491 188 aa1.2□□□□□ -2.22
CDC36YDL165W SBH2P52871 88 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms