RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	GIP3	Q03016	1276 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	YMR130W	Q04223	302 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	EMI1	Q04406	187 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	MDM30	Q05930	598 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	YLR031W	Q07978	186 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	YLR036C	Q07986	203 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	FEX2	Q08991	375 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	ATP16	Q12165	160 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	YPL245W	Q12179	454 aa	Known RBP	3.03	□□□□□ -1.92
CMD1	YBR109C	SIA1	Q12212	622 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	PCL9	Q12477	304 aa		3.03	□□□□□ -1.92
CMD1	YBR109C	YPR096C	O13587	100 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	RPL15A	P05748	204 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	CDC21	P06785	304 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	ZWF1	P11412	505 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	PET9	P18239	318 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	EPT1	P22140	391 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	TAH1	P25638	111 aa	Predicted RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	ATS1	P31386	333 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	NDC1	P32500	655 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	ECM25	P32525	599 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	RPS0A	P32905	252 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
CMD1	YBR109C	COS8	P38723	381 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	YHK8	P38776	514 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	YHR127W	P38833	243 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	GDI1	P39958	451 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	GIM4	P40005	111 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	ERG10	P41338	398 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	GWT1	P47026	490 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	STE24	P47154	453 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	NBP35	P52920	328 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	MKC7	P53379	596 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	OGG1	P53397	376 aa	Predicted RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	IGO1	P53897	168 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	HXT11	P54862	567 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	TIM11	P81449	96 aa	Predicted RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	MRPS16	Q02608	121 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	HER2	Q03557	464 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	COA4	Q05809	96 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	YLR283W	Q05867	314 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	IPK1	Q06667	281 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	RAX1	Q08760	435 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	SAM4	Q08985	325 aa	Known RBP	3.02	□□□□□ -1.93
CMD1	YBR109C	MDM32	Q12171	622 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	NFI1	Q12216	726 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	YLR046C	Q12253	270 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	YLR126C	Q12288	251 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	APC2	Q12440	853 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	PRM4	Q12498	284 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	YKL018C-A	Q3E7A7	99 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	MTR10	Q99189	972 aa		3.02	□□□□□ -1.93
CMD1	YBR109C	DSF1	P0CX08	502 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	YNR073C	P0CX09	502 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	SLM5	P25345	492 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
CMD1	YBR109C	ERG9	P29704	444 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	HOM6	P31116	359 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	ARO7	P32178	256 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	PPQ1	P32945	549 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	JEN1	P36035	616 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	MTC4	P38335	694 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	RPS20	P38701	121 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	INM1	P38710	295 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	TVP23	P38962	199 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	SHO1	P40073	367 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	YMR144W	P40214	342 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	PRE6	P40303	254 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	YKE4	P40544	346 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	SAS2	P40963	338 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	RPE1	P46969	238 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	BIO3	P50277	480 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	ROG1	P53118	685 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	SWC4	P53201	476 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	ERP1	Q05359	219 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	PEX27	Q08580	376 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	NDD1	Q08887	554 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	YOR283W	Q12040	230 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	MHT1	Q12525	324 aa		3.01	□□□□□ -1.93
CMD1	YBR109C	RRP12	Q12754	1228 aa	Known RBP	3.01	□□□□□ -1.93
CMD1	YBR109C	UBR1	P19812	1950 aa		3	□□□□□ -1.93
CMD1	YBR109C	YEL009C-A	A0A023PZF2	135 aa		3	□□□□□ -1.93
CMD1	YBR109C	HIP1	P06775	603 aa		3	□□□□□ -1.93
CMD1	YBR109C	SPS2	P08459	502 aa		3	□□□□□ -1.93
CMD1	YBR109C	PET54	P10834	293 aa		3	□□□□□ -1.93
CMD1	YBR109C	SNF6	P18888	332 aa		3	□□□□□ -1.93
CMD1	YBR109C	ARF2	P19146	181 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	PHO80	P20052	293 aa		3	□□□□□ -1.93
CMD1	YBR109C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
CMD1	YBR109C	SKN1	P33336	771 aa		3	□□□□□ -1.93
CMD1	YBR109C	ZRT3	P34240	503 aa		3	□□□□□ -1.93
CMD1	YBR109C	TMA19	P35691	167 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	IML3	P38265	245 aa		3	□□□□□ -1.93
CMD1	YBR109C	YBR137W	P38276	179 aa		3	□□□□□ -1.93
CMD1	YBR109C	RTC2	P38279	296 aa		3	□□□□□ -1.93
CMD1	YBR109C	YPT35	P38815	214 aa	Known RBP	3	□□□□□ -1.93
CMD1	YBR109C	PTI1	P39927	425 aa	Predicted RBP	3	□□□□□ -1.93
CMD1	YBR109C	FMC1	P40491	155 aa		3	□□□□□ -1.93
CMD1	YBR109C	APQ12	P40532	138 aa		3	□□□□□ -1.93
CMD1	YBR109C	RPR2	P40571	144 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 149.8 ms