RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	SSN8	P47821	323 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	NIT3	P49954	291 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	BRR6	P53062	197 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	YPR084W	Q06821	456 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	HEM25	Q07534	307 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	RRI1	Q12468	440 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	TPI1	P00942	248 aa	Known RBP	3.86	□□□□□ -1.79
RPG1	YBR079C	STE18	P18852	110 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	BUB3	P26449	341 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	PRO1	P32264	428 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	MNL1	P38888	796 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	ASP1	P38986	381 aa	Predicted RBP	3.86	□□□□□ -1.79
RPG1	YBR079C	GIP2	P40036	548 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	YIR035C	P40579	254 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	NRK1	P53915	240 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	SPR28	Q04921	423 aa		3.86	□□□□□ -1.79
RPG1	YBR079C	RPL20A	P0CX23	172 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	RPL20B	P0CX24	172 aa	Predicted RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	ADH7	P25377	361 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	RPS0A	P32905	252 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	MSN4	P33749	630 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	VPS51	P36116	164 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	FMP46	P36141	133 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	TRR2	P38816	342 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	GPI14	P47088	403 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	MNN10	P50108	393 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	SEC13	Q04491	297 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	NOC4	Q06512	552 aa	Predicted RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	YOL073C	Q08232	322 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	ORT1	Q12375	292 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	FRS1	P15624	595 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	ZRC1	P20107	442 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	SPT10	P35208	640 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	YOR062C	P36025	268 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	BET3	P36149	193 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	PRS3	P38689	320 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	FAA3	P39002	694 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	BXI1	P48558	297 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	YGL235W	P53071	178 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	YGL204C	P53089	101 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	CGR1	P53188	120 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	APM1	Q00776	475 aa	Predicted RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	SRP1	Q02821	542 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	RVB1	Q03940	463 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	SPC19	Q03954	165 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	VBA4	Q04602	768 aa	Known RBP	3.85	□□□□□ -1.79
RPG1	YBR079C	YPR127W	Q06494	345 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	HBN1	Q96VH4	193 aa		3.85	□□□□□ -1.79
RPG1	YBR079C	CDC34	P14682	295 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	DCG1	P32460	244 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	ECM25	P32525	599 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	RML2	P32611	393 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	POP8	P38208	133 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	MOG1	P47123	218 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	BUL1	P48524	976 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	BNA7	Q04066	261 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	YOR385W	Q08909	290 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	FCF2	Q12035	217 aa	Predicted RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	LSO2	Q3E772	92 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	GAL1	P04385	528 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	RPS14A	P06367	137 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	NAM2	P11325	894 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	URA6	P15700	204 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	HNM1	P19807	563 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	FPR1	P20081	114 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	RPB8	P20436	146 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	LDS1	P31379	325 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
RPG1	YBR079C	RPD3	P32561	433 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	YKL162C	P36052	402 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	IKI1	P38874	309 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	RPS14B	P39516	138 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	EMC5	P40540	141 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	YIL024C	P40543	189 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	SYS1	P41544	203 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	YFR054C	P43622	192 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	YNR014W	P53719	212 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	FMP41	P53889	259 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	GIM3	P53900	129 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	NRG1	Q03125	231 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	YMR279C	Q03263	540 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	LRS4	Q04087	347 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	MRX8	Q05473	314 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	CRR1	Q05790	422 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	BER1	Q06688	274 aa	Known RBP	3.84	□□□□□ -1.79
RPG1	YBR079C	DGK1	Q12382	290 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	ERP4	Q12450	207 aa		3.84	□□□□□ -1.79
RPG1	YBR079C	SCL1	P21243	252 aa	Known RBP	3.84	□□□□□ -1.8
RPG1	YBR079C	PET18	P25362	215 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	SSH4	P32343	579 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	YBL010C	P32788	280 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	PPZ2	P33329	710 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	MRPL37	P36532	105 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	VBA2	P38358	474 aa	Known RBP	3.84	□□□□□ -1.8
RPG1	YBR079C	SMB1	P40018	196 aa	Known RBP	3.84	□□□□□ -1.8
RPG1	YBR079C	RSM28	Q03430	361 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	YPR145C-A	Q2V2P0	78 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	YLR146W-A	Q2V2P1	62 aa		3.84	□□□□□ -1.8
RPG1	YBR079C	TDH1	P00360	332 aa	Known RBP	3.83	□□□□□ -1.8
RPG1	YBR079C	RPS31	P05759	152 aa	Known RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms