RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
CLK1-215ENST00000621181 CYP3A7P24462 503 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 NCBP1Q09161 790 aaKnown RBP8.72□□□□□ -1.01
CLK1-215ENST00000621181 LAMTOR4Q0VGL1 99 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 NOTUMQ6P988 496 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 CLEC17AQ6ZS10 378 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 PALB2Q86YC2 1186 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 GLYCTKQ8IVS8 523 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 BLIDQ8IZY5 108 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
CLK1-215ENST00000621181 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 MYADMQ96S97 322 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 GAD1Q99259 594 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 RHOBTB2Q9BYZ6 727 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 TRIM6Q9C030 488 aaPredicted RBP8.72□□□□□ -1.01
CLK1-215ENST00000621181 PLEKHA4Q9H4M7 779 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 ARHGEF3Q9NR81 526 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 HES2Q9Y543 173 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 IPPQ9Y573 584 aa8.72□□□□□ -1.01
CLK1-215ENST00000621181 EML1O00423 815 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 CPLX1O14810 134 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 GAS2O43903 313 aaKnown RBP8.71□□□□□ -1.01
CLK1-215ENST00000621181 TRAK2O60296 914 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 LAMP2P13473 410 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 RFC5P40937 340 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 SCNN1GP51170 649 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 DSG1Q02413 1049 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 SSRP1Q08945 709 aaKnown RBP8.71□□□□□ -1.01
CLK1-215ENST00000621181 PPP2R5CQ13362 524 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 INF2Q27J81 1249 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 UBXN11Q5T124 520 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 MOXD1Q6UVY6 613 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 C1orf210Q8IVY1 113 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 FBXL16Q8N461 479 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 SMG8Q8ND04 991 aaKnown RBP8.71□□□□□ -1.01
CLK1-215ENST00000621181 TCP11Q8WWU5 503 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 APOL6Q9BWW8 343 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 MFRPQ9BY79 579 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 NT5C3AQ9H0P0 336 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 DHX33Q9H6R0 707 aaKnown RBP8.71□□□□□ -1.01
CLK1-215ENST00000621181 ZDHHC7Q9NXF8 308 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 PPME1Q9Y570 386 aa8.71□□□□□ -1.01
CLK1-215ENST00000621181 TDRD15B5MCY1 1934 aaKnown RBP8.71□□□□□ -1.02
CLK1-215ENST00000621181 MED19A0JLT2 244 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 F8W810 466 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 INO80B-WBP1J3KQ70 363 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 ASAP2O43150 1006 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 TGM5O43548 720 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 SLC37A4O43826 429 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 P4HBP07237 508 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 XRCC6P12956 609 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLK1-215ENST00000621181 RPS6KB1P23443 525 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 PSMA5P28066 241 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 PDIA3P30101 505 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 AXLP30530 894 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 YWHABP31946 246 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 DSC1Q08554 894 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 EMC2Q15006 297 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLK1-215ENST00000621181 L1TD1Q5T7N2 865 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 KIAA0319Q5VV43 1072 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 DCLRE1AQ6PJP8 1040 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 OTUD6AQ7L8S5 288 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 FERMT3Q86UX7 667 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 HACE1Q8IYU2 909 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 RNF168Q8IYW5 571 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 ST13P5Q8NFI4 369 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 HDAC7Q8WUI4 952 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 RUBCNQ92622 972 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 ZNF707Q96C28 371 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 CPB2Q96IY4 423 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 B3GALT6Q96L58 329 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 LXNQ9BS40 222 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 COLEC11Q9BWP8 271 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 EIF2AQ9BY44 585 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 AGXT2Q9BYV1 514 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 RXFP1Q9HBX9 757 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLK1-215ENST00000621181 SNX14Q9Y5W7 946 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 NUMBLQ9Y6R0 609 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 TPRP12270 2363 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 CACNA1BQ00975 2339 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 NCOR2Q9Y618 2525 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 MTCL1Q9Y4B5 1905 aaKnown RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 K7ELQ4 463 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 M0R2N6 131 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 MARCH6O60337 910 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 DEXIO95424 95 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 SP9P0CG40 484 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 HSPA4P34932 840 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 CREMQ03060 361 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 HTR4Q13639 388 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 MXD4Q14582 209 aaPredicted RBP8.7□□□□□ -1.02
CLK1-215ENST00000621181 PUM1Q14671 1186 aaKnown RBP eCLIP8.7□□□□□ -1.02
CLK1-215ENST00000621181 USP41Q3LFD5 358 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 XKR9Q5GH70 373 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 GALNT17Q6IS24 598 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 FUT10Q6P4F1 479 aa8.7□□□□□ -1.02
CLK1-215ENST00000621181 KRT25Q7Z3Z0 450 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms