RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CTNNB1P35222 781 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 MATR3P43243 847 aaKnown RBP eCLIP21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 LIG4P49917 911 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 GTF2BQ00403 316 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 CUL4BQ13620 913 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 ZC2HC1CQ53FD0 456 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 ZPBP2Q6X784 338 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 KRBA2Q6ZNG9 492 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 UNC13DQ70J99 1090 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 ZNF720Q7Z2F6 126 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 TMEM192Q8IY95 271 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 URGCPQ8TCY9 931 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 RSPH1Q8WYR4 309 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 HVCN1Q96D96 273 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 CCDC34Q96HJ3 373 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 ST6GALNAC4Q9H4F1 302 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 PRDM12Q9H4Q4 367 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 PARP2Q9UGN5 583 aa21.56■■□□□ 1.04
SHKBP1-214ENST00000597396 HNRNPDLO14979 420 aaKnown RBP21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 OFD1O75665 1012 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 HARSP12081 509 aaKnown RBP21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 ALCAMQ13740 583 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 NOMO2Q5JPE7 1267 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 MPZL3Q6UWV2 235 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 ZBTB33Q86T24 672 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 FBXO22Q8NEZ5 403 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 CDT1Q9H211 546 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 RNF39Q9H2S5 420 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 TYW1Q9NV66 732 aaKnown RBP21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 ANKFY1Q9P2R3 1169 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 PCDHB13Q9Y5F0 798 aa21.55■■□□□ 1.04
SHKBP1-214ENST00000597396 GTPBP6O43824 516 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 TOM1L1O75674 476 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 AKAP5P24588 427 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 EPC2Q52LR7 807 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 STXBP4Q6ZWJ1 553 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 MAP4K3Q8IVH8 894 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 TMEM87AQ8NBN3 555 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 CLP1Q92989 425 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 ZBTB45Q96K62 511 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 AAASQ9NRG9 546 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 SNTG2Q9NY99 539 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 GIT1Q9Y2X7 761 aa21.54■■□□□ 1.04
SHKBP1-214ENST00000597396 PVALEFA0A1B0GWK0 134 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 MYL1P05976 194 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 MYBP10242 640 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 MCF2P10911 925 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 PROZP22891 400 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 BMPR1AP36894 532 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 MLH1P40692 756 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 RNASELQ05823 741 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 FAM160A1Q05DH4 1040 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 NOLC1Q14978 699 aaKnown RBP eCLIP21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 FAM26FQ5R3K3 315 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 KANK3Q6NY19 840 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 FMR1NBQ8N0W7 255 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 ACCSQ96QU6 501 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 RPS6KC1Q96S38 1066 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 GAD1Q99259 594 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 GAS2L1Q99501 681 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 PTPRHQ9HD43 1115 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 HCSTQ9UBK5 93 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 EXOC7Q9UPT5 735 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 GDAQ9Y2T3 454 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 PLXNA4Q9HCM2 1894 aa21.53■■□□□ 1.04
SHKBP1-214ENST00000597396 PDCD11Q14690 1871 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 CLDN3O15551 220 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 GADD45BO75293 160 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 PPP1R37O75864 691 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 RECQL4O94761 1208 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 PIGRP01833 764 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 LAG3P18627 525 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 CASP5P51878 434 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 L1TD1Q5T7N2 865 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 LRRC55Q6ZSA7 311 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 HPS3Q969F9 1004 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 CCDC47Q96A33 483 aaKnown RBP21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 CCDC94Q9BW85 323 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 CWH43Q9H720 699 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 EXOC1Q9NV70 894 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 TBC1D13Q9NVG8 400 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 KLK14Q9P0G3 267 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 KANSL3Q9P2N6 904 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 PCDHB12Q9Y5F1 795 aa21.52■■□□□ 1.04
SHKBP1-214ENST00000597396 CHD9Q3L8U1 2897 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 ZMYM2Q9UBW7 1377 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 ARL5CA6NH57 179 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 EPOPA6NHQ4 379 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 RFXAPO00287 272 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 RB1P06400 928 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 LINC00271P0C7V0 271 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 GRM5P41594 1212 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 THNSL1Q8IYQ7 743 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 SYCP3Q8IZU3 236 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 COLGALT1Q8NBJ5 622 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 GDPD5Q8WTR4 605 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 ZFP42Q96MM3 310 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 FAM193BQ96PV7 902 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 STRA6Q9BX79 667 aa21.51■■□□□ 1.03
SHKBP1-214ENST00000597396 PLVAPQ9BX97 442 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms