RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PDZD7Q9H5P4 517 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 TMEM134Q9H6X4 195 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 KCND2Q9NZV8 630 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 PARP2Q9UGN5 583 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 HCFC2Q9Y5Z7 792 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
CCDC9-203ENST00000596938 LILRB3O75022 631 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SYT1P21579 422 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
CCDC9-203ENST00000596938 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
CCDC9-203ENST00000596938 UBA7P41226 1012 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 OR1G1P47890 313 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SLC12A3P55017 1021 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 MAPK7Q13164 816 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 TMEM119Q4V9L6 283 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 NT5DC1Q5TFE4 455 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SYCE2Q6PIF2 218 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
CCDC9-203ENST00000596938 CABP7Q86V35 215 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SUSD6Q92537 303 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 CASP10Q92851 521 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC9-203ENST00000596938 KIFC3Q9BVG8 833 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 COLEC11Q9BWP8 271 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 EPHX3Q9H6B9 360 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 ARHGAP28Q9P2N2 729 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 TNFSF13BQ9Y275 285 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 SSX2IPQ9Y2D8 614 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
CCDC9-203ENST00000596938 C5orf42Q9H799 3197 aa11.59□□□□□ -0.55
CCDC9-203ENST00000596938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 VPS37CA5D8V6 355 aaPredicted RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 K7ELQ4 463 aaPredicted RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 SOD2P04179 222 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 EDN1P05305 212 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 PLA2G4BP0C869 781 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 ALADP13716 330 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 LIG1P18858 919 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 GRIK3Q13003 919 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 DMP1Q13316 513 aaPredicted RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 SF3A1Q15459 793 aaKnown RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 PTPN14Q15678 1187 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 TMEM132AQ24JP5 1023 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 DCAF4L1Q3SXM0 396 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 ATF7IP2Q5U623 682 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 EEF1DP3Q658K8 133 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 PPFIBP1Q86W92 1011 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 GPR65Q8IYL9 337 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 RNF168Q8IYW5 571 aaPredicted RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 SLC22A17Q8WUG5 538 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 AUTS2Q8WXX7 1259 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 CDK5RAP3Q96JB5 506 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 PLIN2Q99541 437 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 PHF7Q9BWX1 381 aaPredicted RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 EMILIN2Q9BXX0 1053 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 PTPRHQ9HD43 1115 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 KMT5AQ9NQR1 393 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 MRPL17Q9NRX2 175 aaKnown RBP11.58□□□□□ -0.56
CCDC9-203ENST00000596938 MARCH5Q9NX47 278 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 KLK14Q9P0G3 267 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
CCDC9-203ENST00000596938 SFI1A8K8P3 1242 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 LOC730098B7Z3J9 87 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 GPR37L1O60883 481 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 C1RP00736 705 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 THP07101 528 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 PLS3P13797 630 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 SMTNP53814 917 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 ITIH3Q06033 890 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 TUSC3Q13454 348 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 CBX2Q14781 532 aaPredicted RBP11.57□□□□□ -0.56
CCDC9-203ENST00000596938 PTPAQ15257 358 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 ARSHQ5FYA8 562 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 LLGL2Q6P1M3 1020 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 TAS1R1Q7RTX1 841 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 KCNN1Q92952 543 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 SNX21Q969T3 373 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 KLHL5Q96PQ7 755 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 RPS6KC1Q96S38 1066 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 ACO2Q99798 780 aaKnown RBP11.57□□□□□ -0.56
CCDC9-203ENST00000596938 MRPL4Q9BYD3 311 aaKnown RBP11.57□□□□□ -0.56
CCDC9-203ENST00000596938 ADAM7Q9H2U9 754 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 RXFP1Q9HBX9 757 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 DZANK1Q9NVP4 752 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 SNTG2Q9NY99 539 aa11.57□□□□□ -0.56
CCDC9-203ENST00000596938 PRG3Q9Y2Y8 225 aaPredicted RBP11.57□□□□□ -0.56
CCDC9-203ENST00000596938 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 TCF20Q9UGU0 1960 aaKnown RBP11.56□□□□□ -0.56
CCDC9-203ENST00000596938 PTGESO14684 152 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 RECQL4O94761 1208 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 BRD1O95696 1058 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 SSBP05455 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms