RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 BAATQ14032 418 aaPredicted RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 PLS1Q14651 629 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 CCL14Q16627 93 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 NFIL3Q16649 462 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 BMT2Q1RMZ1 405 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 PRR16Q569H4 304 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 WDR44Q5JSH3 913 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 FAM26DQ5JW98 314 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 TEX35Q5T0J7 233 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 ARHGEF16Q5VV41 709 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 PAPD7Q5XG87 772 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 PCNX4Q63HM2 1172 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SNRNP48Q6IEG0 339 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 CCDC70Q6NSX1 233 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 TMEM214Q6NUQ4 689 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 CACNA2D4Q7Z3S7 1137 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 KCNK18Q7Z418 384 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 FRMD5Q7Z6J6 570 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 NLRX1Q86UT6 975 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 VSIG10LQ86VR7 867 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 CATSPER3Q86XQ3 398 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 NPAS4Q8IUM7 802 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 TRIM59Q8IWR1 403 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 ALDH16A1Q8IZ83 802 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 ANKRD35Q8N283 1001 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RNF10Q8N5U6 811 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 MSANTD4Q8NCY6 345 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 ACRBPQ8NEB7 543 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 GOLGA5Q8TBA6 731 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RAET1EQ8TD07 263 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 NEK9Q8TD19 979 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SYTL5Q8TDW5 730 aaPredicted RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 TRIB2Q92519 343 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 TBC1D5Q92609 795 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RMDN3Q96TC7 470 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RIT2Q99578 217 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 CHP1Q99653 195 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 MXRA8Q9BRK3 442 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SPATC1LQ9H0A9 340 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 MMRN2Q9H8L6 949 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RNF146Q9NTX7 359 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 ZDHHC3Q9NYG2 299 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 STIM2Q9P246 746 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RNF14Q9UBS8 474 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 SEL1LQ9UBV2 794 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDF2-206ENST00000587788 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 RAB21Q9UL25 225 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 PCDHA2Q9Y5H9 948 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDF2-206ENST00000587788 SAR1BQ9Y6B6 198 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 BZW2Q9Y6E2 419 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 V9GYY5 206 aaPredicted RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 DOCK5Q9H7D0 1870 aa6.28□□□□□ -1.4
SDF2-206ENST00000587788 MKI67P46013 3256 aaKnown RBP6.28□□□□□ -1.4
SDF2-206ENST00000587788 PFASO15067 1338 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 TARSL2A2RTX5 802 aaKnown RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 GTPBP10A4D1E9 387 aaKnown RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 E9PMD0 336 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 NRG2O14511 850 aaPredicted RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 FANCGO15287 622 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 EIF3DO15371 548 aaKnown RBP eCLIP6.27□□□□□ -1.41
SDF2-206ENST00000587788 PJA2O43164 708 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 AKR1B10O60218 316 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 DKC1O60832 514 aaKnown RBP eCLIP6.27□□□□□ -1.41
SDF2-206ENST00000587788 TBCAO75347 108 aaKnown RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 DGAT1O75907 488 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 UPP2O95045 317 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 SERPING1P05155 500 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 PNMA6AP0CW24 399 aaPredicted RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 HOXD10P28358 340 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 CCND2P30279 289 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 MAPK4P31152 587 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 HOXA13P31271 388 aaPredicted RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 AMPD2Q01433 879 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 ITIH3Q06033 890 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 PPP2R5CQ13362 524 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 ADAM9Q13443 819 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 GIT2Q14161 759 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 GRB14Q14449 540 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 ARHGEF6Q15052 776 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 STXBP2Q15833 593 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 KNOP1Q1ED39 458 aaKnown RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 GNPTABQ3T906 1256 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 MAP9Q49MG5 647 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 ARSHQ5FYA8 562 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 WDR78Q5VTH9 848 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 SFMBT2Q5VUG0 894 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 NCAPH2Q6IBW4 605 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 CC2D1AQ6P1N0 951 aaPredicted RBP6.27□□□□□ -1.41
SDF2-206ENST00000587788 WDR93Q6P2C0 686 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 PDXDC1Q6P996 788 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 KCNV1Q6PIU1 500 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 TRAPPC11Q7Z392 1133 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 TRIM46Q7Z4K8 759 aa6.27□□□□□ -1.41
SDF2-206ENST00000587788 PLEKHH3Q7Z736 793 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms