RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 RUSC1Q9BVN2 902 aa19.61■□□□□ 0.73
HDDC3-205ENST00000559898 TRIM6Q9C030 488 aaPredicted RBP19.61■□□□□ 0.73
HDDC3-205ENST00000559898 PRMT7Q9NVM4 692 aaPredicted RBP19.61■□□□□ 0.73
HDDC3-205ENST00000559898 SNTG2Q9NY99 539 aa19.61■□□□□ 0.73
HDDC3-205ENST00000559898 KANSL3Q9P2N6 904 aa19.61■□□□□ 0.73
HDDC3-205ENST00000559898 PTGESO14684 152 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 PCBP1Q15365 356 aaKnown RBP eCLIP19.6■□□□□ 0.73
HDDC3-205ENST00000559898 FAM187BQ17R55 369 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 HFE2Q6ZVN8 426 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 TAS1R3Q7RTX0 852 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 LRRC15Q8TF66 581 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 GPR62Q9BZJ7 368 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 GIT1Q9Y2X7 761 aa19.6■□□□□ 0.73
HDDC3-205ENST00000559898 PRR33A8MZF0 331 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 MAPK7Q13164 816 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 PRPF4BQ13523 1007 aaKnown RBP19.59■□□□□ 0.73
HDDC3-205ENST00000559898 PDIA5Q14554 519 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 ZBTB8OSQ8IWT0 167 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 DEPTORQ8TB45 409 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 RSPH1Q8WYR4 309 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 HERC2P3Q9BVR0 1158 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 ADAM7Q9H2U9 754 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 SMOC2Q9H3U7 446 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 UBN1Q9NPG3 1134 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 MYO10Q9HD67 2058 aa19.59■□□□□ 0.73
HDDC3-205ENST00000559898 SFI1A8K8P3 1242 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 C2CD4DB7Z1M9 353 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 HIP1RO75146 1068 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 SOD2P04179 222 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 NAMPTP43490 491 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 CLCN4P51793 760 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 ATP2C1P98194 919 aaPredicted RBP19.58■□□□□ 0.72
HDDC3-205ENST00000559898 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.72
HDDC3-205ENST00000559898 RAD51AP2Q09MP3 1159 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 ZRSR1Q15695 479 aaKnown RBP19.58■□□□□ 0.72
HDDC3-205ENST00000559898 KIAA0319Q5VV43 1072 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 TMC5Q6UXY8 1006 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 HASPINQ8TF76 798 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 TSHZ2Q9NRE2 1034 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 VWA8A3KMH1 1905 aa19.58■□□□□ 0.72
HDDC3-205ENST00000559898 MYH11P35749 1972 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 CASTOR2A6NHX0 329 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 ACKR2O00590 384 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 RECQL4O94761 1208 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 SPATA31D3P0C874 917 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 SRGAP2BP0DMP2 458 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 HOXB8P17481 243 aaPredicted RBP19.57■□□□□ 0.72
HDDC3-205ENST00000559898 MUTP22033 750 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 KLRC2P26717 231 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 GRIN1Q05586 938 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 NAB2Q15742 525 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 RINT1Q6NUQ1 792 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 DTHD1Q6ZMT9 781 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 SPATA31D4Q6ZUB0 917 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 TMEM130Q8N3G9 435 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 CEP120Q8N960 986 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 EDAQ92838 391 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 GDAQ9Y2T3 454 aa19.57■□□□□ 0.72
HDDC3-205ENST00000559898 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 FSD2A1L4K1 749 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 VWA3AA6NCI4 1184 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 N4BP3O15049 544 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 TEX28O15482 410 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 RPL17P18621 184 aaKnown RBP19.56■□□□□ 0.72
HDDC3-205ENST00000559898 PRPHP41219 470 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 NPTX2P47972 431 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 PEX3P56589 373 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 ZXDAP98168 799 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 MAPK6Q16659 721 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 TPRNQ4KMQ1 711 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 C1orf186Q6ZWK4 172 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 GLYCTKQ8IVS8 523 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 FBXL18Q96ME1 805 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 RPS6KC1Q96S38 1066 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 C2orf40Q9H1Z8 148 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 SMC3Q9UQE7 1217 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 WDFY4Q6ZS81 3184 aa19.56■□□□□ 0.72
HDDC3-205ENST00000559898 H3BQV1 296 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 MEFVO15553 781 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-205ENST00000559898 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-205ENST00000559898 GRIK3Q13003 919 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 TMEM132AQ24JP5 1023 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 GLRA4Q5JXX5 417 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 KRT79Q5XKE5 535 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 FUT10Q6P4F1 479 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 TMEM87AQ8NBN3 555 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 DOCK6Q96HP0 2047 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 MRPL17Q9NRX2 175 aaKnown RBP19.55■□□□□ 0.72
HDDC3-205ENST00000559898 CHST7Q9NS84 486 aa19.55■□□□□ 0.72
HDDC3-205ENST00000559898 MTCL1Q9Y4B5 1905 aaKnown RBP19.55■□□□□ 0.72
HDDC3-205ENST00000559898 CCDC169A6NNP5 214 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 KIF4AO95239 1232 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 URODP06132 367 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 GLUD2P49448 558 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 DSG1Q02413 1049 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 ITIH3Q06033 890 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 GIT2Q14161 759 aa19.54■□□□□ 0.72
HDDC3-205ENST00000559898 RILPL1Q5EBL4 403 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms