RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CCDC144BQ3MJ40 725 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 FAM47CQ5HY64 1035 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 TMEM164Q5U3C3 297 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 DIEXFQ68CQ4 756 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CDC42EP5Q6NZY7 148 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 SEZ6L2Q6UXD5 910 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 RSPO2Q6UXX9 243 aaPredicted RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ADAMTSL4Q6UY14 1074 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 SYDE1Q6ZW31 735 aaPredicted RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 LRRC8DQ7L1W4 858 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CYFIP1Q7L576 1253 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ATCAYQ86WG3 371 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 GALNT12Q8IXK2 581 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 PLD6Q8N2A8 252 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 RASGRP4Q8TDF6 673 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 AFG1LQ8WV93 481 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ADAMTS14Q8WXS8 1223 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CASP10Q92851 521 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CLDN23Q96B33 292 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 KIRREL1Q96J84 757 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 COX4I2Q96KJ9 171 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 HHIPQ96QV1 700 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 MPHOSPH8Q99549 860 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 THUMPD2Q9BTF0 503 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ISCA1Q9BUE6 129 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 IFIH1Q9BYX4 1025 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 NRSN2Q9GZP1 204 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 EHD4Q9H223 541 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 HOXC10Q9NYD6 342 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CRIM1Q9NZV1 1036 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 COL5A1P20908 1838 aaPredicted RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 TLN2Q9Y4G6 2542 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 COL6A5A8TX70 2615 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ARHGEF17Q96PE2 2063 aaPredicted RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MROH5Q6ZUA9 1318 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 NDUFB5O43674 189 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 NBNO60934 754 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ENTPD3O75355 529 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SNAI1O95863 264 aaPredicted RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 DLGAP3O95886 979 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ITGB1P05556 798 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ASNSP08243 561 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 TDGF1P13385 188 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ACPPP15309 386 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ITPKAP23677 461 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MPSTP25325 297 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MPLP40238 635 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MCAMP43121 646 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CCR3P51677 355 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CXADRP78310 365 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 PTPN11Q06124 597 aaPredicted RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MESP2Q0VG99 397 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 BNIP3Q12983 259 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MTAPQ13126 283 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SRSF5Q13243 272 aaKnown RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 TAF7Q15545 349 aaPredicted RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 NFE2L2Q16236 605 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 HGSNATQ68CP4 663 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 KIAA1841Q6NSI8 718 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 LLGL2Q6P1M3 1020 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 DBX2Q6ZNG2 339 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CATSPERGQ6ZRH7 1159 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CACNA2D4Q7Z3S7 1137 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 LONP2Q86WA8 852 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 NPAS4Q8IUM7 802 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SPATA20Q8TB22 786 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 RTF1Q92541 710 aaKnown RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CITED4Q96RK1 184 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MMP19Q99542 508 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 IER2Q9BTL4 223 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 DDX23Q9BUQ8 820 aaKnown RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SPATC1LQ9H0A9 340 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 EPB41L4BQ9H329 900 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 ABHD16BQ9H3Z7 469 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SMOC1Q9H4F8 434 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SLC2A4RGQ9NR83 387 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 DKK3Q9UBP4 350 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CDH22Q9UJ99 828 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 DENND2AQ9ULE3 1009 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SUGT1Q9Y2Z0 365 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 MTF2Q9Y483 593 aaPredicted RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 DOCK8Q8NF50 2099 aa2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 SPENQ96T58 3664 aaKnown RBP2.73□□□□□ -1.97
TRAV1-1-201ENST00000542354 CSMD1Q96PZ7 3565 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 IL16Q14005 1332 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 ASCC3Q8N3C0 2202 aaKnown RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 A0A1W2PP55 124 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 LNP1A1A4G5 178 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 VPS37CA5D8V6 355 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 UPK3BL1B0FP48 263 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CHURC1-FNTBB4DL54 471 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 UPK3BL2E5RIL1 263 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CDX4O14627 284 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 TMPRSS2O15393 492 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 DYNC1LI2O43237 492 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 SUV39H1O43463 412 aa2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CPNE3O75131 537 aaKnown RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 FRAT2O75474 233 aaPredicted RBP2.72□□□□□ -1.97
TRAV1-1-201ENST00000542354 CAVIN2O95810 425 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms