RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SNTG2Q9NY99 539 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 GIT1Q9Y2X7 761 aa10.62□□□□□ -0.71
MSH5-218ENST00000494646 MTCL1Q9Y4B5 1905 aaKnown RBP10.61□□□□□ -0.71
MSH5-218ENST00000494646 PRR33A8MZF0 331 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 H3BQV1 296 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 EDN1P05305 212 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 HOXB8P17481 243 aaPredicted RBP10.61□□□□□ -0.71
MSH5-218ENST00000494646 PTPN14Q15678 1187 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 HAUS3Q68CZ6 603 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 CES5AQ6NT32 575 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 DTHD1Q6ZMT9 781 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 GSTCDQ8NEC7 633 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 SLC22A17Q8WUG5 538 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 RSPH1Q8WYR4 309 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 KLHL5Q96PQ7 755 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 KIFC3Q9BVG8 833 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 CXCL16Q9H2A7 254 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 FZD8Q9H461 694 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
MSH5-218ENST00000494646 MARCH5Q9NX47 278 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 CACNG4Q9UBN1 327 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 PLXNA3P51805 1871 aa10.61□□□□□ -0.71
MSH5-218ENST00000494646 TECTAO75443 2155 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 C2orf16Q68DN1 1984 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 CARNS1A5YM72 827 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 LILRB3O75022 631 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 NR1I2O75469 434 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 SOD2P04179 222 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 PRKCBP05771 671 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 CNPP09543 421 aaKnown RBP10.6□□□□□ -0.71
MSH5-218ENST00000494646 PRPF4BQ13523 1007 aaKnown RBP10.6□□□□□ -0.71
MSH5-218ENST00000494646 GIT2Q14161 759 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 MAPK6Q16659 721 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
MSH5-218ENST00000494646 KRT79Q5XKE5 535 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 CDCA2Q69YH5 1023 aaPredicted RBP10.6□□□□□ -0.71
MSH5-218ENST00000494646 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 HACE1Q8IYU2 909 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 IGSF22Q8N9C0 903 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 DEPTORQ8TB45 409 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 EDAQ92838 391 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 B3GALT6Q96L58 329 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 IFT74Q96LB3 600 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 PLIN2Q99541 437 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 COLEC11Q9BWP8 271 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 ADAM7Q9H2U9 754 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 POMKQ9H5K3 350 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
MSH5-218ENST00000494646 MRPL17Q9NRX2 175 aaKnown RBP10.6□□□□□ -0.71
MSH5-218ENST00000494646 DNM3Q9UQ16 869 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 HCN4Q9Y3Q4 1203 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 IRAK3Q9Y616 596 aa10.6□□□□□ -0.71
MSH5-218ENST00000494646 DOCK6Q96HP0 2047 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 CCDC169A6NNP5 214 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 SFI1A8K8P3 1242 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 ACKR2O00590 384 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 TADA2AO75478 443 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 SPATA31D3P0C874 917 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 MUTP22033 750 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 NAMPTP43490 491 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 PEX3P56589 373 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 ZXDAP98168 799 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 ITIH3Q06033 890 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 DSC1Q08554 894 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 FAM187BQ17R55 369 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 ATAT1Q5SQI0 421 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 NT5DC1Q5TFE4 455 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 SPATA31D4Q6ZUB0 917 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 HFE2Q6ZVN8 426 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 CABP7Q86V35 215 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 PALB2Q86YC2 1186 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 GLYCTKQ8IVS8 523 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 FAM122AQ96E09 287 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 RPS6KC1Q96S38 1066 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 PAAF1Q9BRP4 392 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 EMILIN2Q9BXX0 1053 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 RAB34Q9BZG1 259 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 GPR62Q9BZJ7 368 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 PDZD7Q9H5P4 517 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 SMC3Q9UQE7 1217 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 GDAQ9Y2T3 454 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
MSH5-218ENST00000494646 CASTOR2A6NHX0 329 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 K7ERI5 159 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 LAD1O00515 517 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 N4BP3O15049 544 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 INPPL1O15357 1258 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 URODP06132 367 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 MTHFRP42898 656 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 CLCN4P51793 760 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 RAD51AP2Q09MP3 1159 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 RILPL1Q5EBL4 403 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 KIAA0319Q5VV43 1072 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
MSH5-218ENST00000494646 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
MSH5-218ENST00000494646 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms