RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PVALEFA0A1B0GWK0 134 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 TOM1L1O75674 476 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 PIGRP01833 764 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 ABCD1P33897 745 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 CASP5P51878 434 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 EHHADHQ08426 723 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 SNW1Q13573 536 aaKnown RBP14.85□□□□□ -0.03
COL1A1-208ENST00000494334 ZNF568Q3ZCX4 644 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 NOMO2Q5JPE7 1267 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 MPZL3Q6UWV2 235 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 ZBTB33Q86T24 672 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 HACE1Q8IYU2 909 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 FMR1NBQ8N0W7 255 aaPredicted RBP14.85□□□□□ -0.03
COL1A1-208ENST00000494334 LRRC43Q8N309 656 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 TMEM87AQ8NBN3 555 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 ENGASEQ8NFI3 743 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 RSPH1Q8WYR4 309 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 HPS3Q969F9 1004 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 GAD1Q99259 594 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 TCHPQ9BT92 498 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 MRPL9Q9BYD2 267 aaKnown RBP14.85□□□□□ -0.03
COL1A1-208ENST00000494334 CDT1Q9H211 546 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 MIOSQ9NXC5 875 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 PARP2Q9UGN5 583 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 INPP5FQ9Y2H2 1132 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 RWDD3Q9Y3V2 267 aa14.85□□□□□ -0.03
COL1A1-208ENST00000494334 C5orf67F2Z3F1 127 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 INPPL1O15357 1258 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 GTPBP6O43824 516 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-208ENST00000494334 KLRC4O43908 158 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 GADD45BO75293 160 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-208ENST00000494334 GCNT3O95395 438 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 RB1P06400 928 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 MYBP10242 640 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 MCF2P10911 925 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 CTNNB1P35222 781 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 MLH1P40692 756 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 KCNA1Q09470 495 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 ADGRE1Q14246 886 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 SPOUT1Q5T280 376 aaKnown RBP14.84□□□□□ -0.03
COL1A1-208ENST00000494334 APBB1IPQ7Z5R6 666 aaPredicted RBP14.84□□□□□ -0.03
COL1A1-208ENST00000494334 CEP120Q8N960 986 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 GSTCDQ8NEC7 633 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 FBXO22Q8NEZ5 403 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 MYLIPQ8WY64 445 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 HVCN1Q96D96 273 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 BICD1Q96G01 975 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 ZFP42Q96MM3 310 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 PLVAPQ9BX97 442 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 HAPLN2Q9GZV7 340 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 TBC1D13Q9NVG8 400 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 PCDHB13Q9Y5F0 798 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 MYH11P35749 1972 aa14.84□□□□□ -0.03
COL1A1-208ENST00000494334 ARL5CA6NH57 179 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 H3BNC9 293 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 HNRNPDLO14979 420 aaKnown RBP14.83□□□□□ -0.04
COL1A1-208ENST00000494334 CLDN3O15551 220 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 LPXNO60711 386 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 PRPF6O94906 941 aaKnown RBP14.83□□□□□ -0.04
COL1A1-208ENST00000494334 POMCP01189 267 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 MYL1P05976 194 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 PRR29P0C7W0 189 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 LIG4P49917 911 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 FAM160A1Q05DH4 1040 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 MCL1Q07820 350 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 FAM26FQ5R3K3 315 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 L1TD1Q5T7N2 865 aaKnown RBP14.83□□□□□ -0.04
COL1A1-208ENST00000494334 SLC39A4Q6P5W5 647 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 GLIS3Q8NEA6 775 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 URGCPQ8TCY9 931 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 GDPD5Q8WTR4 605 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 ACCSQ96QU6 501 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 IKZF4Q9H2S9 585 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 NRDE2Q9H7Z3 1164 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 KLK14Q9P0G3 267 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 KANSL3Q9P2N6 904 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 ANKFY1Q9P2R3 1169 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 GDAQ9Y2T3 454 aa14.83□□□□□ -0.04
COL1A1-208ENST00000494334 FNDC1Q4ZHG4 1894 aaPredicted RBP14.82□□□□□ -0.04
COL1A1-208ENST00000494334 ANKRD63C9JTQ0 380 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 RECQL4O94761 1208 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 DDHD2O94830 711 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 HARSP12081 509 aaKnown RBP14.82□□□□□ -0.04
COL1A1-208ENST00000494334 LAG3P18627 525 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 GRM5P41594 1212 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 SCNN1GP51170 649 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 OSTNP61366 133 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 GPM6BQ13491 265 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 ALCAMQ13740 583 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 NOLC1Q14978 699 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL1A1-208ENST00000494334 CLEC17AQ6ZS10 378 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 ZNF280BQ86YH2 543 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 THNSL1Q8IYQ7 743 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 KLHL23Q8NBE8 558 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 COLGALT1Q8NBJ5 622 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 P2RX5Q93086 422 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 GAS2L1Q99501 681 aaPredicted RBP14.82□□□□□ -0.04
COL1A1-208ENST00000494334 CXCL16Q9H2A7 254 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 AAASQ9NRG9 546 aa14.82□□□□□ -0.04
COL1A1-208ENST00000494334 PCDHB12Q9Y5F1 795 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms