RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
SNX17-208ENST00000493711 NFX1Q12986 1120 aaKnown RBP13.59□□□□□ -0.23
SNX17-208ENST00000493711 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.236e-7■□□□□ 10.4
SNX17-208ENST00000493711 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 KLHL10Q6JEL2 608 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 ARMCX5Q6P1M9 558 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 SLC27A1Q6PCB7 646 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 SLC9A9Q8IVB4 645 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 AGPAT3Q9NRZ7 376 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 PIN4Q9Y237 131 aaKnown RBP13.59□□□□□ -0.23
SNX17-208ENST00000493711 ARID2Q68CP9 1835 aa13.59□□□□□ -0.23
SNX17-208ENST00000493711 TRIOBPQ9H2D6 2365 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 A0A0B4J269 797 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 B4GALT5O43286 388 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 TGFB1I1O43294 461 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 NBNO60934 754 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 CSDE1O75534 798 aaKnown RBP13.58□□□□□ -0.24
SNX17-208ENST00000493711 ACTN1P12814 892 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 PROZP22891 400 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
SNX17-208ENST00000493711 MATR3P43243 847 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX17-208ENST00000493711 ZNF165P49910 485 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 MCL1Q07820 350 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 KCNA1Q09470 495 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 MBTPS1Q14703 1052 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 NOLC1Q14978 699 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX17-208ENST00000493711 TPD52L1Q16890 204 aaPredicted RBP13.58□□□□□ -0.24
SNX17-208ENST00000493711 ANO6Q4KMQ2 910 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 ZCWPW2Q504Y3 356 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 CNKSR3Q6P9H4 555 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 ENOX1Q8TC92 643 aaKnown RBP13.58□□□□□ -0.24
SNX17-208ENST00000493711 POMGNT1Q8WZA1 660 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 CEP63Q96MT8 703 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 LBHD1Q9BQE6 289 aaPredicted RBP13.58□□□□□ -0.24
SNX17-208ENST00000493711 DNAJC25Q9H1X3 360 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 SEMA6BQ9H3T3 888 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 AGO3Q9H9G7 860 aaKnown RBP13.58□□□□□ -0.24
SNX17-208ENST00000493711 PTPRHQ9HD43 1115 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 UMODL1Q5DID0 1318 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.24
SNX17-208ENST00000493711 IKBKBO14920 756 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 CETN3O15182 167 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 GNA14O95837 355 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 NR3C1P04150 777 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 FGFR4P22455 802 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 TPM4P67936 248 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 MYL5Q02045 173 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 FPGSQ05932 587 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 IKBKEQ14164 716 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 DSC3Q14574 896 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 ZNF568Q3ZCX4 644 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 SPATA1Q5VX52 437 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 TWF2Q6IBS0 349 aaKnown RBP13.57□□□□□ -0.24
SNX17-208ENST00000493711 TTI2Q6NXR4 508 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 CSGALNACT2Q8N6G5 542 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 XXYLT1Q8NBI6 393 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 RSPH1Q8WYR4 309 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 SCLYQ96I15 445 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
SNX17-208ENST00000493711 IL23AQ9NPF7 189 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
SNX17-208ENST00000493711 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
SNX17-208ENST00000493711 ABHD14A-ACY1A0A1B0GW23 586 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 BECN2A8MW95 431 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 MAPK13O15264 365 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 OGTO15294 1046 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
SNX17-208ENST00000493711 BAIAP3O94812 1187 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 CLTAP09496 248 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
SNX17-208ENST00000493711 NR2F2P24468 414 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 ADAM9Q13443 819 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 ANKRD40Q6AI12 368 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 C11orf57Q6ZUT1 292 aaPredicted RBP13.56□□□□□ -0.24
SNX17-208ENST00000493711 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 USP37Q86T82 979 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 DBF4BQ8NFT6 615 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 FAM200AQ8TCP9 573 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 CPB2Q96IY4 423 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 ADAM2Q99965 735 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 MKNK1Q9BUB5 465 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 UBN1Q9NPG3 1134 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 RGS18Q9NS28 235 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 DMAC2Q9NW81 257 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 HSPBP1Q9NZL4 362 aa13.56□□□□□ -0.24
SNX17-208ENST00000493711 WDR81Q562E7 1941 aa13.55□□□□□ -0.24
SNX17-208ENST00000493711 A0A0U1RQF3 1178 aa13.55□□□□□ -0.24
SNX17-208ENST00000493711 ABLIM1O14639 778 aa13.55□□□□□ -0.24
SNX17-208ENST00000493711 EXTL3O43909 919 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms