RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 F11P03951 625 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 THEGLP0DJG4 465 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 VEGFAP15692 232 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 YBX3P16989 372 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ALAS2P22557 587 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 EEF1GP26641 437 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 CASQ1P31415 396 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 HPDP32754 393 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TNNT2P45379 298 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 NOP2P46087 812 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 POLD2P49005 469 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 NR1H2P55055 460 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 CASP6P55212 293 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 BCAR1P56945 870 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 LACTBP83111 547 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ATP11AP98196 1134 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 GSTM4Q03013 218 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SPEM2Q0P670 501 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 GALNT1Q10472 559 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PTK2BQ14289 1009 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 BECN1Q14457 450 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PLS1Q14651 629 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SLMAPQ14BN4 828 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PDCD1Q15116 288 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 POU4F3Q15319 338 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TESK1Q15569 626 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PKN2Q16513 984 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 UGT8Q16880 541 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PRSS53Q2L4Q9 553 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PARP10Q53GL7 1025 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 NBPF12Q5TAG4 269 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 E4F1Q66K89 784 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 THSD4Q6ZMP0 1018 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 BEND5Q7L4P6 421 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 RASGRP2Q7LDG7 609 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ARHGEF25Q86VW2 580 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 C12orf40Q86WS4 652 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PPIL6Q8IXY8 311 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SAMD14Q8IZD0 417 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TXLNBQ8N3L3 684 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 CARNMT1Q8N4J0 409 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 AFAP1Q8N556 730 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ANKRD52Q8NB46 1076 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SIMC1Q8NDZ2 872 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 MGARPQ8TDB4 240 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TGFBRAP1Q8WUH2 860 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 RUFY2Q8WXA3 655 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 HERVK_113Q902F9 699 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TTC9Q92623 222 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 HTRA1Q92743 480 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 BHMTQ93088 406 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SNX21Q969T3 373 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 MUL1Q969V5 352 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 NSUN4Q96CB9 384 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 MTFMTQ96DP5 389 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SUCLG2Q96I99 432 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 JAKMIP1Q96N16 626 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 INSM2Q96T92 566 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 YME1L1Q96TA2 773 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 KLF16Q9BXK1 252 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 USP26Q9BXU7 913 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 EDEM3Q9BZQ6 932 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ZC3H12CQ9C0D7 883 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ARHGAP39Q9C0H5 1083 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PDCL3Q9H2J4 239 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PCIF1Q9H4Z3 704 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 CNTD2Q9H8S5 307 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SP110Q9HB58 689 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SAYSD1Q9NPB0 183 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 SERHLQ9NQF3 203 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ACSS2Q9NR19 701 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 KRT84Q9NSB2 600 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 CATSPERZQ9NTU4 200 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 GPATCH2Q9NW75 528 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 TJP2Q9UDY2 1190 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 HERC5Q9UII4 1024 aaKnown RBP3.22□□□□□ -1.89
HMGN4-202ENST00000477243 FBXL21Q9UKT6 434 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 RABL2BQ9UNT1 228 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 PCDHGC4Q9Y5F7 938 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 USP34Q70CQ2 3546 aa3.22□□□□□ -1.89
HMGN4-202ENST00000477243 NPATQ14207 1427 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 C9orf84Q5VXU9 1444 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ATRQ13535 2644 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 DISP1Q96F81 1524 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 RNF223E7ERA6 249 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 PI4K2BG5E9Z4 385 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 RNF225M0QZC1 329 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 MPHOSPH10O00566 681 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SOX1O00570 391 aaPredicted RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ACKR2O00590 384 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 NDC80O14777 642 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 NPC1O15118 1278 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 PHGDHO43175 533 aaKnown RBP3.21□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF862O60290 1169 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SGPL1O95470 568 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 GSNP06396 782 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 TSHRP16473 764 aa3.21□□□□□ -1.9
HMGN4-202ENST00000477243 SLC9A1P19634 815 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms