RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PCDHB13Q9Y5F0 798 aa16.39■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZMYM2Q9UBW7 1377 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 ABLIM1O14639 778 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 TOM1L1O75674 476 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 GCNT3O95395 438 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 MYBP10242 640 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 ATF7P17544 494 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 IGFBP4P22692 258 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 HTRA4P83105 476 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 TFF2Q03403 129 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 PNOCQ13519 176 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZC2HC1CQ53FD0 456 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 PPP2R2DQ66LE6 453 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 APBB1IPQ7Z5R6 666 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 GSDMAQ96QA5 445 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 ADPGKQ9BRR6 497 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 FGFBP2Q9BYJ0 223 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 RC3H2Q9HBD1 1191 aaKnown RBP16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 PCDHB2Q9Y5E7 798 aa16.38■□□□□ 0.21
CDC42SE1-203ENST00000470278 HNRNPDLO14979 420 aaKnown RBP16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 LPXNO60711 386 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 SMC2O95347 1197 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 TAP1Q03518 808 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 BMT2Q1RMZ1 405 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 MPZL3Q6UWV2 235 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 MRPL10Q7Z7H8 261 aaKnown RBP16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 HPS3Q969F9 1004 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 TARS2Q9BW92 718 aaKnown RBP16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 EIF2AQ9BY44 585 aaKnown RBP16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 TMEM206Q9H813 350 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 EXOC7Q9UPT5 735 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 MTCH2Q9Y6C9 303 aa16.37■□□□□ 0.21
CDC42SE1-203ENST00000470278 FNDC1Q4ZHG4 1894 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 NLRC5Q86WI3 1866 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 HOXA2O43364 376 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 DGKIO75912 1065 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 MBD3O95983 291 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 BMP1P13497 986 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 MCM4P33991 863 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 LIG4P49917 911 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 MCL1Q07820 350 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 TMEM132AQ24JP5 1023 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZNF568Q3ZCX4 644 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 EEF1DP3Q658K8 133 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 TMCO2Q7Z6W1 182 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 HACE1Q8IYU2 909 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 KIAA0895Q8NCT3 520 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 SMG8Q8ND04 991 aaKnown RBP16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 GLIS3Q8NEA6 775 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 ZNF689Q96CS4 500 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 PGBD4Q96DM1 585 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 CERS4Q9HA82 394 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 LRFN2Q9ULH4 789 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 USP20Q9Y2K6 914 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 IPPQ9Y573 584 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 STYXL1Q9Y6J8 313 aa16.36■□□□□ 0.21
CDC42SE1-203ENST00000470278 LCHNA4D1U4 455 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 NPTXRO95502 500 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 MCF2P10911 925 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 KCNQ1P51787 676 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 MRPS5P82675 430 aaKnown RBP16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 STK4Q13043 487 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 SLC39A4Q6P5W5 647 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 CDR2LQ86X02 465 aaPredicted RBP16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 SCFD1Q8WVM8 642 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 BICD1Q96G01 975 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 RAD9AQ99638 391 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 CDT1Q9H211 546 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 UBN1Q9NPG3 1134 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 INSL6Q9Y581 213 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 MYO7AQ13402 2215 aa16.35■□□□□ 0.21
CDC42SE1-203ENST00000470278 RALGAPA2Q2PPJ7 1873 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 INPPL1O15357 1258 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 CLDN3O15551 220 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 TLL1O43897 1013 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 HOXD13P35453 343 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 KCNA1Q09470 495 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 COBLL1Q53SF7 1204 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 YME1L1Q96TA2 773 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 RNF19AQ9NV58 838 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms