RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PP2D1A8MPX8 630 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 PDGFBP01127 241 aaPredicted RBP18.93■□□□□ 0.62
CPSF4-203ENST00000430038 CDC25AP30304 524 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 RBM25P49756 843 aaKnown RBP18.93■□□□□ 0.62
CPSF4-203ENST00000430038 EEF1DP3Q658K8 133 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 PBXIP1Q96AQ6 731 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 KIFC3Q9BVG8 833 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 PDZD7Q9H5P4 517 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 PIEZO1Q92508 2521 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 DOCK8Q8NF50 2099 aa18.93■□□□□ 0.62
CPSF4-203ENST00000430038 TEX28O15482 410 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 ASGR2P07307 311 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 KLRC2P26717 231 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 FXR2P51116 673 aaKnown RBP eCLIP18.92■□□□□ 0.62
CPSF4-203ENST00000430038 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
CPSF4-203ENST00000430038 PTGDRQ13258 359 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 GIT2Q14161 759 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 NAB2Q15742 525 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 FAM187BQ17R55 369 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 KIAA1841Q6NSI8 718 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 CES5AQ6NT32 575 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 CCDC43Q96MW1 224 aaKnown RBP18.92■□□□□ 0.62
CPSF4-203ENST00000430038 HERC2P3Q9BVR0 1158 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 SH2B1Q9NRF2 756 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-203ENST00000430038 CHST7Q9NS84 486 aa18.92■□□□□ 0.62
CPSF4-203ENST00000430038 PTGESO14684 152 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 EIF5BO60841 1220 aaKnown RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 BRD1O95696 1058 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 SPATA31D3P0C874 917 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 SIGLEC14Q08ET2 396 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 ORC2Q13416 577 aaPredicted RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 BMS1Q14692 1282 aaKnown RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 SPATA31D4Q6ZUB0 917 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 KCNK18Q7Z418 384 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 GPR149Q86SP6 731 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 CABP7Q86V35 215 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 IGSF22Q8N9C0 903 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 FAM184AQ8NB25 1140 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 KREMEN2Q8NCW0 462 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 MCPH1Q8NEM0 835 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 PRSS33Q8NF86 280 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 RPS6KC1Q96S38 1066 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 MMTAG2Q9BU76 263 aaKnown RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 TRIM6Q9C030 488 aaPredicted RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 BHMT2Q9H2M3 363 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 MRPL17Q9NRX2 175 aaKnown RBP18.91■□□□□ 0.62
CPSF4-203ENST00000430038 DZANK1Q9NVP4 752 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 SNTG2Q9NY99 539 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 PARP2Q9UGN5 583 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 LIMD1Q9UGP4 676 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 KIAA1024Q9UPX6 916 aa18.91■□□□□ 0.62
CPSF4-203ENST00000430038 ARHGEF35A5YM69 484 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 CARNS1A5YM72 827 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 E9PMD0 336 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 CCT6AP40227 531 aaKnown RBP18.9■□□□□ 0.62
CPSF4-203ENST00000430038 MTHFRP42898 656 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 TRAPPC10P48553 1259 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 VCPP55072 806 aaKnown RBP18.9■□□□□ 0.62
CPSF4-203ENST00000430038 DSG1Q02413 1049 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 NHLH1Q02575 133 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 ATAT1Q5SQI0 421 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 NT5DC1Q5TFE4 455 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 DAW1Q8N136 415 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 MFSD14AQ96MC6 490 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 NECTIN4Q96NY8 510 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 PHOX2BQ99453 314 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 RXFP1Q9HBX9 757 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 PRMT7Q9NVM4 692 aaPredicted RBP18.9■□□□□ 0.62
CPSF4-203ENST00000430038 LRWD1Q9UFC0 647 aa18.9■□□□□ 0.62
CPSF4-203ENST00000430038 ACKR2O00590 384 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 N4BP1O75113 896 aaKnown RBP18.89■□□□□ 0.61
CPSF4-203ENST00000430038 RPL17P18621 184 aaKnown RBP18.89■□□□□ 0.61
CPSF4-203ENST00000430038 LIG1P18858 919 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 PDIA5Q14554 519 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 ALYREFQ86V81 257 aaKnown RBP18.89■□□□□ 0.61
CPSF4-203ENST00000430038 TMEM87AQ8NBN3 555 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 PRIMPOLQ96LW4 560 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 RIPOR3Q96MK2 946 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 EMILIN2Q9BXX0 1053 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
CPSF4-203ENST00000430038 DDX19AQ9NUU7 478 aaKnown RBP18.89■□□□□ 0.61
CPSF4-203ENST00000430038 MYH11P35749 1972 aa18.89■□□□□ 0.61
CPSF4-203ENST00000430038 RFPL2O75678 378 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 PRKCBP05771 671 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 NAMPTP43490 491 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 GLUD2P49448 558 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 PRPF4BQ13523 1007 aaKnown RBP18.88■□□□□ 0.61
CPSF4-203ENST00000430038 FUT10Q6P4F1 479 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 TAS1R3Q7RTX0 852 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 PPFIBP1Q86W92 1011 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 PALB2Q86YC2 1186 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 GLYCTKQ8IVS8 523 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 FBXL6Q8N531 539 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 ERMNQ8TAM6 284 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 HASPINQ8TF76 798 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 COLEC11Q9BWP8 271 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 SFXN1Q9H9B4 322 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 MAN1C1Q9NR34 630 aa18.88■□□□□ 0.61
CPSF4-203ENST00000430038 NR2E1Q9Y466 385 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms