RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 SKIP12755 728 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 ARF4P18085 180 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CDK11BP21127 795 aaKnown RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CCNE1P24864 410 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 ZNF165P49910 485 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 OSTNP61366 133 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 SNRPFP62306 86 aaKnown RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 LRRC63Q05C16 580 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 ADAM9Q13443 819 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 NOLC1Q14978 699 aaKnown RBP eCLIP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 BMT2Q1RMZ1 405 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 DCAF4L1Q3SXM0 396 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CCDC40Q4G0X9 1142 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CT47A1Q5JQC4 288 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 LCE2DQ5TA82 110 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 SLC27A1Q6PCB7 646 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 EPM2AIP1Q7L775 607 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CSGALNACT2Q8N6G5 542 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 DBF4BQ8NFT6 615 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CCDC51Q96ER9 411 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CCDC94Q9BW85 323 aaPredicted RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 WNT8AQ9H1J5 351 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 MTIF3Q9H2K0 278 aaKnown RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 ERVK-5Q9HDB9 667 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 AGPAT3Q9NRZ7 376 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 AGPAT5Q9NUQ2 364 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 RWDD2AQ9UIY3 292 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 AGO2Q9UKV8 859 aaKnown RBP9.75□□□□□ -0.85
BRCC3-206ENST00000399042 TNFSF13BQ9Y275 285 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 CNTNAP2Q9UHC6 1331 aa9.75□□□□□ -0.85
BRCC3-206ENST00000399042 LOXHD1Q8IVV2 1947 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 A0A1B0GUA9 196 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 GOLGA8IPA6NC78 632 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 GOLGA8JA6NMD2 632 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PES1O00541 588 aaKnown RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 LDHAP00338 332 aaKnown RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 FGBP02675 491 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 NR3C1P04150 777 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 TPM2P07951 284 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PFKMP08237 780 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 MCF2P10911 925 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 EPB41P11171 864 aaKnown RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 KRT13P13646 458 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 BMP6P22004 513 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 GARTP22102 1010 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 NR2F2P24468 414 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 KCNJ6P48051 423 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 RAB27AP51159 221 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 FKBP3Q00688 224 aaKnown RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 MBTPS1Q14703 1052 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 KYAT1Q16773 422 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 COBLL1Q53SF7 1204 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PPP1R15BQ5SWA1 713 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 ANKRD40Q6AI12 368 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 CNKSR3Q6P9H4 555 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 TAS1R3Q7RTX0 852 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 USP37Q86T82 979 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 FAM114A1Q8IWE2 563 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 XXYLT1Q8NBI6 393 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 RDH13Q8NBN7 331 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 SAAL1Q96ER3 474 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 ZBTB45Q96K62 511 aaPredicted RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 FAM213AQ9BRX8 229 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 STRA6Q9BX79 667 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 SRRTQ9BXP5 876 aaKnown RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PDZD7Q9H5P4 517 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 IL23AQ9NPF7 189 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 C1orf112Q9NSG2 853 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 HSPBP1Q9NZL4 362 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 R3HCC1Q9Y3T6 440 aaKnown RBP9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PCDHB7Q9Y5E2 793 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 PCDHB2Q9Y5E7 798 aa9.74□□□□□ -0.85
BRCC3-206ENST00000399042 BRCA2P51587 3418 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 TRIM49BA6NDI0 452 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 ZNF233A6NK53 670 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 TISP43B9A030 160 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 KIAA0391O15091 583 aaKnown RBP9.73□□□□□ -0.85
BRCC3-206ENST00000399042 EFCAB14O75071 495 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 UPP2O95045 317 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 AMHP03971 560 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 ITGA4P13612 1032 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 ITGB8P26012 769 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 HOXA11P31270 313 aaPredicted RBP9.73□□□□□ -0.85
BRCC3-206ENST00000399042 MYL5Q02045 173 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 AMHR2Q16671 573 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 CENPPQ6IPU0 288 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 PSRC1Q6PGN9 363 aaPredicted RBP9.73□□□□□ -0.85
BRCC3-206ENST00000399042 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
BRCC3-206ENST00000399042 C11orf57Q6ZUT1 292 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms