RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 BIN1O00499 593 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 MGEA5O60502 916 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 EOMESO95936 686 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 OR52Z1P0C646 297 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 SLFN14P0C7P3 912 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 ALADP13716 330 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 ATP2B1P20020 1258 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 FAM189BP81408 668 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 CYP4A11Q02928 519 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 CAMK1Q14012 370 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 TRIM14Q14142 442 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 CTTNQ14247 550 aaKnown RBP11.39□□□□□ -0.59
COL5A1-202ENST00000371820 EMC2Q15006 297 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 PAN2Q504Q3 1202 aaKnown RBP11.39□□□□□ -0.59
COL5A1-202ENST00000371820 SPATA1Q5VX52 437 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 E4F1Q66K89 784 aaPredicted RBP11.39□□□□□ -0.59
COL5A1-202ENST00000371820 ARMCX5Q6P1M9 558 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 PPFIBP1Q86W92 1011 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 MNS1Q8NEH6 495 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 ERMNQ8TAM6 284 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 NLRP4Q96MN2 994 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 MTRQ99707 1265 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 BAG1Q99933 345 aaPredicted RBP11.39□□□□□ -0.59
COL5A1-202ENST00000371820 SH2D3AQ9BRG2 576 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 RAB34Q9BZG1 259 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 TMEM117Q9H0C3 514 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 TUFT1Q9NNX1 390 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 TRMT1Q9NXH9 659 aaKnown RBP11.39□□□□□ -0.59
COL5A1-202ENST00000371820 RGL1Q9NZL6 768 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 DNAI1Q9UI46 699 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
COL5A1-202ENST00000371820 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 PCDHB12Q9Y5F1 795 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 COL4A3BPQ9Y5P4 624 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 ARID2Q68CP9 1835 aa11.39□□□□□ -0.59
COL5A1-202ENST00000371820 A0A087WZ62 844 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 TBKBP1A7MCY6 615 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 POLR2DO15514 142 aaKnown RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 DCXO43602 365 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 TBX10O75333 385 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 DGAT1O75907 488 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 SLITRK3O94933 977 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 LAG3P18627 525 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 CASQ1P31415 396 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 TXLNAP40222 546 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 RAB27AP51159 221 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 NPEPPSP55786 919 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 CBX1P83916 185 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 UBE3AQ05086 875 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 DLX2Q07687 328 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 TBX2Q13207 712 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 DRP2Q13474 957 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 PNOCQ13519 176 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 TFDP1Q14186 410 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 MXD4Q14582 209 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 PCBP1Q15365 356 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 ARL6IP4Q66PJ3 421 aaKnown RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 HAUS3Q68CZ6 603 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 SRGAP1Q7Z6B7 1085 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 ECHDC2Q86YB7 292 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 ADHFE1Q8IWW8 467 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 LRRC43Q8N309 656 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 IQUBQ8NA54 791 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 ZNF668Q96K58 619 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 FDXACB1Q9BRP7 624 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 ALG13Q9NP73 1137 aaKnown RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 WRAP73Q9P2S5 460 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-202ENST00000371820 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
COL5A1-202ENST00000371820 A0A0U1RQF3 1178 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 AKR1B15C9JRZ8 316 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 LAD1O00515 517 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 MBTPS2O43462 519 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 CSPG5O95196 566 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 ITGB1P05556 798 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 MUTP22033 750 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 DNAJB1P25685 340 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 PHKA2P46019 1235 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 SMAD4Q13485 552 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 NR1I3Q14994 352 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 SMAD2Q15796 467 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 SYT10Q6XYQ8 523 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 CNGA4Q8IV77 575 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 GPR161Q8N6U8 529 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 HSD17B14Q9BPX1 270 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 TRAIPQ9BWF2 469 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 MRPL9Q9BYD2 267 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 FANCLQ9NW38 375 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 MYO1AQ9UBC5 1043 aa11.37□□□□□ -0.59
COL5A1-202ENST00000371820 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
COL5A1-202ENST00000371820 MUC6Q6W4X9 2439 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms