RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ANKRD44Q8N8A2 993 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 BRI3BPQ8WY22 251 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 TEKT1Q969V4 418 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 KCNC2Q96PR1 638 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 DEPDC7Q96QD5 511 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 CDC6Q99741 560 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 PARD6AQ9NPB6 346 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 NUB1Q9Y5A7 615 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 PCDHB4Q9Y5E5 795 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 UTYO14607 1347 aa6.44□□□□□ -1.38
RNU4-4P-201ENST00000364588 ADCY3O60266 1144 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 PDE8BO95263 885 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 C8BP07358 591 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 BMP7P18075 431 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 EN2P19622 333 aaPredicted RBP6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 GRK2P25098 689 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 GRK3P35626 688 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 LONRF2Q1L5Z9 754 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 VWA3BQ502W6 1294 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZC3H12BQ5HYM0 836 aaKnown RBP6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 MAMDC2Q7Z304 686 aaPredicted RBP6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 FAM43AQ8N2R8 423 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 VGLL2Q8N8G2 317 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 TBC1D22AQ8WUA7 517 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZKSCAN4Q969J2 545 aaPredicted RBP6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 WRNIP1Q96S55 665 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 ALG1Q9BT22 464 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 TMOD2Q9NZR1 351 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 PFDN2Q9UHV9 154 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 PTCH2Q9Y6C5 1203 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 BRCA2P51587 3418 aa6.43□□□□□ -1.38
RNU4-4P-201ENST00000364588 KIAA0100Q14667 2235 aaKnown RBP6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 SH3D21A4FU49 640 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 IFIT1P09914 478 aaKnown RBP6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 PUM3Q15397 648 aaKnown RBP6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 YOD1Q5VVQ6 348 aaPredicted RBP6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 APOBEC3HQ6NTF7 200 aaKnown RBP6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 LBX2Q6XYB7 198 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 MIGA2Q7L4E1 593 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 SCUBE1Q8IWY4 988 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 SSH1Q8WYL5 1049 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 MKL1Q969V6 931 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 ARHGAP39Q9C0H5 1083 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 USP44Q9H0E7 712 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 SNTG2Q9NY99 539 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 NTMQ9P121 344 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 MYOTQ9UBF9 498 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZNF521Q96K83 1311 aa6.42□□□□□ -1.38
RNU4-4P-201ENST00000364588 TRBV23-1A0A0A0MS06 115 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 BTBD19C9JJ37 291 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 AQP7O14520 342 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 FFAR3O14843 346 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SMARCA5O60264 1052 aaPredicted RBP6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 CETPP11597 493 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SLC5A1P13866 664 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 NAT1P18440 290 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 FGFR2P21802 821 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZEB1P37275 1124 aaPredicted RBP6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 NKX3-2P78367 333 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 TCP10Q12799 353 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 NTRK3Q16288 839 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SLC4A8Q2Y0W8 1093 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SLC9C1Q4G0N8 1177 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 LIPIQ6XZB0 460 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 FAM83AQ86UY5 434 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 ERO1BQ86YB8 467 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 TRIM48Q8IWZ4 208 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SH3TC2Q8TF17 1288 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZBTB8AQ96BR9 441 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZNF333Q96JL9 665 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SIL1Q9H173 461 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 SMOC1Q9H4F8 434 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 DTLQ9NZJ0 730 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 MAST3O60307 1309 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 PTPRCP08575 1304 aa6.41□□□□□ -1.38
RNU4-4P-201ENST00000364588 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 FAM47E-STBD1D6RA91 191 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 EYA2O00167 538 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 TLR2O60603 784 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 MSCO60682 206 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 TADA3O75528 432 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 APPP05067 770 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 PRDX5P30044 214 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 RFX5P48382 616 aaPredicted RBP6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 SPIRE1Q08AE8 756 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 PPIL2Q13356 520 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 SNAPC2Q13487 334 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 KIF22Q14807 665 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 ARHGEF6Q15052 776 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 HABP4Q5JVS0 413 aaKnown RBP6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 KCNT2Q6UVM3 1135 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 HHIPL2Q6UWX4 724 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 CD300LDQ6UXZ3 194 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 LINC00482Q8N8I6 264 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms