RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 NOP16P40007 231 aaKnown RBP-2.56□□□□□ -2.82
snR53snR53 YGR219WP53307 113 aa-2.56□□□□□ -2.82
snR53snR53 MRS2Q01926 470 aa-2.56□□□□□ -2.82
snR53snR53 CSM3Q04659 317 aa-2.56□□□□□ -2.82
snR53snR53 GEP5Q12393 293 aa-2.56□□□□□ -2.82
snR53snR53 PRM4Q12498 284 aa-2.56□□□□□ -2.82
snR53snR53 ARG3P05150 338 aa-2.57□□□□□ -2.82
snR53snR53 GAL3P13045 520 aa-2.57□□□□□ -2.82
snR53snR53 GDH2P33327 1092 aaKnown RBP-2.57□□□□□ -2.82
snR53snR53 SRY1P36007 326 aa-2.57□□□□□ -2.82
snR53snR53 YIL001WP40560 513 aa-2.57□□□□□ -2.82
snR53snR53 DOS2P54858 310 aa-2.57□□□□□ -2.82
snR53snR53 VPS72Q03388 795 aa-2.57□□□□□ -2.82
snR53snR53 RPN12P32496 274 aa-2.58□□□□□ -2.82
snR53snR53 GCG1P32656 232 aaKnown RBP-2.58□□□□□ -2.82
snR53snR53 TVP38P36164 337 aa-2.58□□□□□ -2.82
snR53snR53 YHR177WP38867 453 aa-2.58□□□□□ -2.82
snR53snR53 KRE29P40026 464 aa-2.58□□□□□ -2.82
snR53snR53 LYS12P40495 371 aaKnown RBP-2.58□□□□□ -2.82
snR53snR53 RPS29BP41058 56 aaKnown RBP-2.58□□□□□ -2.82
snR53snR53 HCH1P53834 153 aa-2.58□□□□□ -2.82
snR53snR53 YLR030WQ07967 263 aa-2.58□□□□□ -2.82
snR53snR53 RPN5Q12250 445 aaKnown RBP-2.58□□□□□ -2.82
snR53snR53 PSY3Q12318 242 aa-2.58□□□□□ -2.82
snR53snR53 YHR032W-AP0C5N6 59 aa-2.59□□□□□ -2.82
snR53snR53 PRX1P34227 261 aaKnown RBP-2.59□□□□□ -2.82
snR53snR53 DRE2P36152 348 aa-2.59□□□□□ -2.82
snR53snR53 SVP26P38869 228 aa-2.59□□□□□ -2.82
snR53snR53 EDC3P39998 551 aaKnown RBP-2.59□□□□□ -2.82
snR53snR53 JHD2P47156 728 aaPredicted RBP-2.59□□□□□ -2.82
snR53snR53 RAD3P06839 778 aa-2.6□□□□□ -2.83
snR53snR53 FAA1P30624 700 aaKnown RBP-2.6□□□□□ -2.83
snR53snR53 YBR062CP38239 180 aa-2.6□□□□□ -2.83
snR53snR53 NOC2P39744 710 aaKnown RBP-2.6□□□□□ -2.83
snR53snR53 SER3P40054 469 aa-2.6□□□□□ -2.83
snR53snR53 SMD3P43321 101 aaKnown RBP-2.6□□□□□ -2.83
snR53snR53 YOL159C-AQ3E769 90 aa-2.6□□□□□ -2.83
snR53snR53 RED1P14291 827 aa-2.61□□□□□ -2.83
snR53snR53 RPC53P25441 422 aa-2.61□□□□□ -2.83
snR53snR53 PHO89P38361 574 aa-2.61□□□□□ -2.83
snR53snR53 FAD1P38913 306 aa-2.61□□□□□ -2.83
snR53snR53 YNL247WP53852 767 aaKnown RBP-2.61□□□□□ -2.83
snR53snR53 MEH1Q02205 184 aa-2.61□□□□□ -2.83
snR53snR53 ADH6Q04894 360 aaKnown RBP-2.61□□□□□ -2.83
snR53snR53 IMH1Q06704 911 aaKnown RBP-2.61□□□□□ -2.83
snR53snR53 CLB3P24870 427 aa-2.62□□□□□ -2.83
snR53snR53 EFB1P32471 206 aaKnown RBP-2.62□□□□□ -2.83
snR53snR53 SLM4P38247 162 aa-2.62□□□□□ -2.83
snR53snR53 SPP381P38282 291 aaPredicted RBP-2.62□□□□□ -2.83
snR53snR53 MDM34P53083 459 aa-2.62□□□□□ -2.83
snR53snR53 TAZ1Q06510 381 aa-2.62□□□□□ -2.83
snR53snR53 DDR48P18899 430 aaKnown RBP-2.63□□□□□ -2.83
snR53snR53 RNP1P32385 249 aa-2.63□□□□□ -2.83
snR53snR53 UIP5P36137 443 aa-2.63□□□□□ -2.83
snR53snR53 YIL102CP40488 101 aa-2.63□□□□□ -2.83
snR53snR53 ERD1P16151 362 aa-2.64□□□□□ -2.83
snR53snR53 UGA1P17649 471 aa-2.64□□□□□ -2.83
snR53snR53 PSO2P30620 661 aa-2.64□□□□□ -2.83
snR53snR53 SSH4P32343 579 aa-2.64□□□□□ -2.83
snR53snR53 YPC1P38298 316 aa-2.64□□□□□ -2.83
snR53snR53 RCY1P39531 840 aa-2.64□□□□□ -2.83
snR53snR53 IES5P40060 125 aa-2.64□□□□□ -2.83
snR53snR53 YLR456WQ06199 204 aa-2.64□□□□□ -2.83
snR53snR53 RDL2Q08742 149 aaKnown RBP-2.64□□□□□ -2.83
snR53snR53 SFG1Q12507 346 aa-2.64□□□□□ -2.83
snR53snR53 ISN1Q99312 450 aa-2.64□□□□□ -2.83
snR53snR53 Q0255P03881 472 aa-2.65□□□□□ -2.83
snR53snR53 PET9P18239 318 aaKnown RBP-2.65□□□□□ -2.83
snR53snR53 ARF2P19146 181 aaKnown RBP-2.65□□□□□ -2.83
snR53snR53 ERG2P32352 222 aa-2.65□□□□□ -2.83
snR53snR53 PUP2P32379 260 aa-2.65□□□□□ -2.83
snR53snR53 KAP104P38217 918 aaKnown RBP-2.65□□□□□ -2.83
snR53snR53 PGD1P40356 397 aa-2.65□□□□□ -2.83
snR53snR53 ARF3P40994 183 aaRIP-Chip data-2.65□□□□□ -2.83not detected
snR53snR53 TOS8P53147 276 aa-2.65□□□□□ -2.83
snR53snR53 RSM10Q03201 203 aa-2.65□□□□□ -2.83
snR53snR53 YLR307C-AQ3E825 87 aa-2.65□□□□□ -2.83
snR53snR53 LAG2Q92325 660 aa-2.65□□□□□ -2.83
snR53snR53 MET17P06106 444 aa-2.66□□□□□ -2.84
snR53snR53 PDE2P06776 526 aa-2.66□□□□□ -2.84
snR53snR53 GDS1P41913 522 aa-2.66□□□□□ -2.84
snR53snR53 OST2P46964 130 aa-2.66□□□□□ -2.84
snR53snR53 NIF3P53081 288 aa-2.66□□□□□ -2.84
snR53snR53 DBR1P24309 405 aaKnown RBP-2.67□□□□□ -2.84
snR53snR53 CSG2P35206 410 aa-2.67□□□□□ -2.84
snR53snR53 SMT3Q12306 101 aaKnown RBP-2.67□□□□□ -2.84
snR53snR53 YRF1-4O13559 1382 aa-2.68□□□□□ -2.84
snR53snR53 ERG9P29704 444 aa-2.68□□□□□ -2.84
snR53snR53 COT1P32798 439 aa-2.68□□□□□ -2.84
snR53snR53 AVT7P40501 490 aa-2.68□□□□□ -2.84
snR53snR53 ARO8P53090 500 aaKnown RBP-2.68□□□□□ -2.84
snR53snR53 RET3P53600 189 aa-2.68□□□□□ -2.84
snR53snR53 TIM10P87108 93 aa-2.68□□□□□ -2.84
snR53snR53 RCE1Q03530 315 aa-2.68□□□□□ -2.84
snR53snR53 YDL180WQ12301 547 aa-2.68□□□□□ -2.84
snR53snR53 RPS16AP0CX51 143 aaKnown RBP-2.69□□□□□ -2.84
snR53snR53 RPS16BP0CX52 143 aaKnown RBP-2.69□□□□□ -2.84
snR53snR53 MAL32P38158 584 aa-2.69□□□□□ -2.84
snR53snR53 POP8P38208 133 aa-2.69□□□□□ -2.84
snR53snR53 YHL042WP38729 150 aa-2.69□□□□□ -2.84
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms