RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 VPH1P32563 840 aaKnown RBP1.16□□□□□ -2.22
snR41snR41 CAB4P53332 305 aa1.16□□□□□ -2.22
snR41snR41 BUR2Q05949 395 aa1.16□□□□□ -2.22
snR41snR41 TAL1P15019 335 aaKnown RBP1.15□□□□□ -2.23
snR41snR41 TOM40P23644 387 aaKnown RBP1.15□□□□□ -2.23
snR41snR41 YJL016WP47072 561 aa1.15□□□□□ -2.23
snR41snR41 SWT21P53873 357 aaPredicted RBP1.15□□□□□ -2.23
snR41snR41 NOT5Q12514 560 aaPredicted RBP1.15□□□□□ -2.23
snR41snR41 PAN1P32521 1480 aa1.14□□□□□ -2.23
snR41snR41 RAD7P06779 565 aa1.14□□□□□ -2.23
snR41snR41 AEP1P32493 518 aa1.14□□□□□ -2.23
snR41snR41 YOR062CP36025 268 aa1.14□□□□□ -2.23
snR41snR41 YPC1P38298 316 aa1.14□□□□□ -2.23
snR41snR41 LIN1P38852 340 aaPredicted RBP1.14□□□□□ -2.23
snR41snR41 SHQ1P40486 507 aaPredicted RBP1.14□□□□□ -2.23
snR41snR41 YPT32P51996 222 aaKnown RBP1.14□□□□□ -2.23
snR41snR41 YGR168CP53293 376 aa1.14□□□□□ -2.23
snR41snR41 MRS2Q01926 470 aa1.14□□□□□ -2.23
snR41snR41 ISD11Q6Q560 94 aa1.14□□□□□ -2.23
snR41snR41 RNR2P09938 399 aaKnown RBP1.13□□□□□ -2.23
snR41snR41 RPL18AP0CX49 186 aaKnown RBP1.13□□□□□ -2.23
snR41snR41 RPL18BP0CX50 186 aaKnown RBP1.13□□□□□ -2.23
snR41snR41 RPL16BP26785 198 aaKnown RBP1.13□□□□□ -2.23
snR41snR41 ZRT1P32804 376 aa1.13□□□□□ -2.23
snR41snR41 YHL026CP38740 315 aa1.13□□□□□ -2.23
snR41snR41 MPP10P47083 593 aaKnown RBP1.13□□□□□ -2.23
snR41snR41 COG7P53195 279 aa1.13□□□□□ -2.23
snR41snR41 NUP157P40064 1391 aaKnown RBP1.12□□□□□ -2.23
snR41snR41 RAD10P06838 210 aa1.12□□□□□ -2.23
snR41snR41 YKL162CP36052 402 aa1.12□□□□□ -2.23
snR41snR41 CUE3P53137 624 aaKnown RBP1.12□□□□□ -2.23
snR41snR41 SWC4P53201 476 aa1.12□□□□□ -2.23
snR41snR41 BOL1Q3E793 110 aa1.12□□□□□ -2.23
snR41snR41 YBL112CQ3E7Y4 105 aa1.12□□□□□ -2.23
snR41snR41 YCR102CP25608 368 aa1.11□□□□□ -2.23
snR41snR41 POT1P27796 417 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
snR41snR41 LAS1P36146 502 aaPredicted RBP1.11□□□□□ -2.23
snR41snR41 LSM4P40070 187 aaKnown RBP1.11□□□□□ -2.23
snR41snR41 TIF34P40217 347 aaKnown RBP1.11□□□□□ -2.23
snR41snR41 AYR1P40471 297 aa1.11□□□□□ -2.23
snR41snR41 AVT7P40501 490 aa1.11□□□□□ -2.23
snR41snR41 RPE1P46969 238 aa1.11□□□□□ -2.23
snR41snR41 STE23Q06010 1027 aa1.11□□□□□ -2.23
snR41snR41 ERP4Q12450 207 aa1.11□□□□□ -2.23
snR41snR41 BMH1P29311 267 aaKnown RBP1.1□□□□□ -2.23
snR41snR41 YDR089WP38966 869 aa1.1□□□□□ -2.23
snR41snR41 GDS1P41913 522 aa1.1□□□□□ -2.23
snR41snR41 IZH4Q99393 312 aa1.1□□□□□ -2.23
snR41snR41 YEL009C-AA0A023PZF2 135 aa1.09□□□□□ -2.23
snR41snR41 RPL31AP0C2H8 113 aaKnown RBP1.09□□□□□ -2.23
snR41snR41 MSS116P15424 664 aaKnown RBP1.09□□□□□ -2.23
snR41snR41 ATG15P25641 520 aa1.09□□□□□ -2.23
snR41snR41 ERG2P32352 222 aa1.09□□□□□ -2.23
snR41snR41 KRE6P32486 720 aa1.09□□□□□ -2.23
snR41snR41 COT1P32798 439 aa1.09□□□□□ -2.23
snR41snR41 SIF2P38262 535 aa1.09□□□□□ -2.23
snR41snR41 YHI9P38765 294 aa1.09□□□□□ -2.23
snR41snR41 YPL039WQ03080 316 aa1.09□□□□□ -2.23
snR41snR41 GAL3P13045 520 aa1.08□□□□□ -2.24
snR41snR41 POP8P38208 133 aa1.08□□□□□ -2.24
snR41snR41 PHO89P38361 574 aa1.08□□□□□ -2.24
snR41snR41 PDR16P53860 351 aaKnown RBP1.08□□□□□ -2.24
snR41snR41 YML018CQ03730 393 aa1.08□□□□□ -2.24
snR41snR41 YMR114CQ04471 368 aaKnown RBP1.08□□□□□ -2.24
snR41snR41 ECM18Q04623 453 aa1.08□□□□□ -2.24
snR41snR41 TAZ1Q06510 381 aa1.08□□□□□ -2.24
snR41snR41 PML1Q07930 204 aaPredicted RBP1.08□□□□□ -2.24
snR41snR41 CAT2P32796 670 aaKnown RBP1.07□□□□□ -2.24
snR41snR41 SPT8P38915 602 aa1.07□□□□□ -2.24
snR41snR41 SEN34P39707 275 aa1.07□□□□□ -2.24
snR41snR41 SAM4Q08985 325 aaKnown RBP1.07□□□□□ -2.24
snR41snR41 YPR064WQ12492 139 aa1.07□□□□□ -2.24
snR41snR41 YPL247CQ12523 523 aa1.07□□□□□ -2.24
snR41snR41 SCM4P32564 187 aa1.06□□□□□ -2.24
snR41snR41 DOA4P32571 926 aa1.06□□□□□ -2.24
snR41snR41 DRE2P36152 348 aa1.06□□□□□ -2.24
snR41snR41 GON7P46984 123 aa1.06□□□□□ -2.24
snR41snR41 YJL118WP47022 219 aa1.06□□□□□ -2.24
snR41snR41 PBP4Q07362 185 aaKnown RBP1.06□□□□□ -2.24
snR41snR41 YOL019WQ08157 551 aa1.06□□□□□ -2.24
snR41snR41 APC9Q12107 265 aa1.06□□□□□ -2.24
snR41snR41 NFI1Q12216 726 aa1.06□□□□□ -2.24
snR41snR41 YOR114WQ12219 294 aa1.06□□□□□ -2.24
snR41snR41 RRP42Q12277 265 aaPredicted RBP1.06□□□□□ -2.24
snR41snR41 CSG2P35206 410 aa1.05□□□□□ -2.24
snR41snR41 YER135CP40082 130 aa1.05□□□□□ -2.24
snR41snR41 DAD3P69850 94 aa1.05□□□□□ -2.24
snR41snR41 RCF1Q03713 159 aa1.05□□□□□ -2.24
snR41snR41 DPP1Q05521 289 aa1.05□□□□□ -2.24
snR41snR41 SMT3Q12306 101 aaKnown RBP1.05□□□□□ -2.24
snR41snR41 PSY3Q12318 242 aa1.05□□□□□ -2.24
snR41snR41 PPH21P23594 369 aa1.04□□□□□ -2.24
snR41snR41 SUA5P32579 426 aa1.04□□□□□ -2.24
snR41snR41 GDH2P33327 1092 aaKnown RBP1.04□□□□□ -2.24
snR41snR41 SKI2P35207 1287 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
snR41snR41 CDC7P06243 507 aa1.03□□□□□ -2.24
snR41snR41 SWC5P38326 303 aa1.03□□□□□ -2.24
snR41snR41 ARN2P38724 620 aa1.03□□□□□ -2.24
snR41snR41 PEX12Q04370 399 aa1.03□□□□□ -2.24
snR41snR41 PAA1Q12447 191 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms