RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C SHQ1P40486 507 aaPredicted RBP2.62□□□□□ -1.99
CCL1YPR025C YFR045WP43617 309 aa2.62□□□□□ -1.99
CCL1YPR025C LIF1P53150 421 aa2.62□□□□□ -1.99
CCL1YPR025C RPN14P53196 417 aa2.62□□□□□ -1.99
CCL1YPR025C YNL260CP53846 198 aa2.62□□□□□ -1.99
CCL1YPR025C YDR222WQ04925 415 aa2.62□□□□□ -1.99
CCL1YPR025C DPP1Q05521 289 aa2.62□□□□□ -1.99
CCL1YPR025C DXO1Q06349 442 aa2.62□□□□□ -1.99
CCL1YPR025C GPN3Q06543 272 aa2.62□□□□□ -1.99
CCL1YPR025C BER1Q06688 274 aaKnown RBP2.62□□□□□ -1.99
CCL1YPR025C AEP1P32493 518 aa2.61□□□□□ -1.99
CCL1YPR025C AVT7P40501 490 aa2.61□□□□□ -1.99
CCL1YPR025C YIA6P40556 373 aa2.61□□□□□ -1.99
CCL1YPR025C SYS1P41544 203 aa2.61□□□□□ -1.99
CCL1YPR025C ECO1P43605 281 aa2.61□□□□□ -1.99
CCL1YPR025C UFD1P53044 361 aa2.61□□□□□ -1.99
CCL1YPR025C YNL050CP53952 270 aa2.61□□□□□ -1.99
CCL1YPR025C ERV25P54837 211 aaKnown RBP2.61□□□□□ -1.99
CCL1YPR025C MRS2Q01926 470 aa2.61□□□□□ -1.99
CCL1YPR025C EGD1Q02642 157 aaKnown RBP2.61□□□□□ -1.99
CCL1YPR025C YMR209CQ03648 457 aa2.61□□□□□ -1.99
CCL1YPR025C CSI1Q04368 295 aa2.61□□□□□ -1.99
CCL1YPR025C ILV1P00927 576 aaKnown RBP2.6□□□□□ -1.99
CCL1YPR025C RPC40P07703 335 aaKnown RBP2.6□□□□□ -1.99
CCL1YPR025C YAK1P14680 807 aa2.6□□□□□ -1.99
CCL1YPR025C YKL070WP36087 169 aa2.6□□□□□ -1.99
CCL1YPR025C SMC2P38989 1170 aaKnown RBP2.6□□□□□ -1.99
CCL1YPR025C SGT2Q12118 346 aaKnown RBP2.6□□□□□ -1.99
CCL1YPR025C YOR114WQ12219 294 aa2.6□□□□□ -1.99
CCL1YPR025C VPS1P21576 704 aaKnown RBP2.59□□□□□ -1.99
CCL1YPR025C TKL2P33315 681 aa2.59□□□□□ -1.99
CCL1YPR025C YBL081WP38180 368 aaKnown RBP2.59□□□□□ -1.99
CCL1YPR025C MED8P38304 223 aa2.59□□□□□ -1.99
CCL1YPR025C CPD1P53314 239 aa2.59□□□□□ -1.99
CCL1YPR025C OSH6Q02201 448 aa2.59□□□□□ -1.99
CCL1YPR025C NNT1Q05874 261 aa2.59□□□□□ -1.99
CCL1YPR025C YPR096CO13587 100 aa2.58□□□□□ -2
CCL1YPR025C FRS2P15625 503 aaKnown RBP2.58□□□□□ -2
CCL1YPR025C PHO80P20052 293 aa2.58□□□□□ -2
CCL1YPR025C YSR3P23501 404 aa2.58□□□□□ -2
CCL1YPR025C PPQ1P32945 549 aa2.58□□□□□ -2
CCL1YPR025C RIB7P33312 244 aa2.58□□□□□ -2
CCL1YPR025C SEN34P39707 275 aa2.58□□□□□ -2
CCL1YPR025C SPO73P40031 143 aa2.58□□□□□ -2
CCL1YPR025C RTT105P40063 208 aa2.58□□□□□ -2
CCL1YPR025C AVT6P40074 448 aa2.58□□□□□ -2
CCL1YPR025C BUD13P46947 266 aaPredicted RBP2.58□□□□□ -2
CCL1YPR025C TPN1P53099 579 aa2.58□□□□□ -2
CCL1YPR025C MND1P53102 219 aa2.58□□□□□ -2
CCL1YPR025C YML018CQ03730 393 aa2.58□□□□□ -2
CCL1YPR025C TAF9Q05027 157 aa2.58□□□□□ -2
CCL1YPR025C RRP36Q12481 300 aaPredicted RBP2.58□□□□□ -2
CCL1YPR025C FMP16Q12497 93 aa2.58□□□□□ -2
CCL1YPR025C TDH1P00360 332 aaKnown RBP2.57□□□□□ -2
CCL1YPR025C SUA5P32579 426 aa2.57□□□□□ -2
CCL1YPR025C COT1P32798 439 aa2.57□□□□□ -2
CCL1YPR025C YHL044WP38727 235 aa2.57□□□□□ -2
CCL1YPR025C YJL144WP47009 104 aa2.57□□□□□ -2
CCL1YPR025C COG7P53195 279 aa2.57□□□□□ -2
CCL1YPR025C PET494P07390 489 aaPredicted RBP2.56□□□□□ -2
CCL1YPR025C YOL163WP0CF20 169 aa2.56□□□□□ -2
CCL1YPR025C PEX31P53203 462 aa2.56□□□□□ -2
CCL1YPR025C SWT21P53873 357 aaPredicted RBP2.56□□□□□ -2
CCL1YPR025C YDL144CQ07589 356 aa2.56□□□□□ -2
CCL1YPR025C MRX4Q12467 430 aa2.56□□□□□ -2
CCL1YPR025C MET2P08465 486 aa2.55□□□□□ -2
CCL1YPR025C OSM1P21375 501 aaKnown RBP2.55□□□□□ -2
CCL1YPR025C FMP33P46998 180 aa2.55□□□□□ -2
CCL1YPR025C YDR114CQ04597 100 aa2.55□□□□□ -2
CCL1YPR025C HRT1Q08273 121 aa2.55□□□□□ -2
CCL1YPR025C ATG15P25641 520 aa2.54□□□□□ -2
CCL1YPR025C KRE6P32486 720 aa2.54□□□□□ -2
CCL1YPR025C ALK2P32789 676 aaPredicted RBP2.54□□□□□ -2
CCL1YPR025C POP8P38208 133 aa2.54□□□□□ -2
CCL1YPR025C PHO89P38361 574 aa2.54□□□□□ -2
CCL1YPR025C PEX18P38855 283 aa2.54□□□□□ -2
CCL1YPR025C MRX5P47007 382 aa2.54□□□□□ -2
CCL1YPR025C HSH155P49955 971 aaKnown RBP2.54□□□□□ -2
CCL1YPR025C MIG2P53035 382 aa2.54□□□□□ -2
CCL1YPR025C YGL088WP53151 121 aa2.54□□□□□ -2
CCL1YPR025C RSM27P53305 110 aa2.54□□□□□ -2
CCL1YPR025C DIA1P54005 336 aa2.54□□□□□ -2
CCL1YPR025C SPP2Q02521 185 aa2.54□□□□□ -2
CCL1YPR025C VPS60Q03390 229 aa2.54□□□□□ -2
CCL1YPR025C VBA1Q04301 562 aa2.54□□□□□ -2
CCL1YPR025C PRR2Q12310 699 aa2.54□□□□□ -2
CCL1YPR025C ATG5Q12380 294 aa2.54□□□□□ -2
CCL1YPR025C YMR316C-AI2HB70 103 aa2.53□□□□□ -2
CCL1YPR025C SSA3P09435 649 aaKnown RBP2.53□□□□□ -2
CCL1YPR025C OM45P16547 393 aa2.53□□□□□ -2
CCL1YPR025C CAT2P32796 670 aaKnown RBP2.53□□□□□ -2
CCL1YPR025C EBP2P36049 427 aaKnown RBP2.53□□□□□ -2
CCL1YPR025C TRM7P38238 310 aaKnown RBP2.53□□□□□ -2
CCL1YPR025C RPE1P46969 238 aa2.53□□□□□ -2
CCL1YPR025C IBA57P47158 497 aa2.53□□□□□ -2
CCL1YPR025C ALG9P53868 555 aaKnown RBP2.53□□□□□ -2
CCL1YPR025C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
CCL1YPR025C TVP15Q03860 143 aa2.53□□□□□ -2
CCL1YPR025C SFH1Q06168 426 aa2.53□□□□□ -2
CCL1YPR025C YLL007CQ07799 665 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms