RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C ATG18P43601 500 aa2.41□□□□□ -2.02
YMR050CYMR050C IRC7P43623 340 aa2.41□□□□□ -2.02
YMR050CYMR050C LSM1P47017 172 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C EKI1Q03764 534 aa2.41□□□□□ -2.02
YMR050CYMR050C YMR321CQ04898 105 aa2.41□□□□□ -2.02
YMR050CYMR050C GAS2Q06135 555 aa2.41□□□□□ -2.02
YMR050CYMR050C CDD1Q06549 142 aa2.41□□□□□ -2.02
YMR050CYMR050C PRM3Q08931 133 aa2.41□□□□□ -2.02
YMR050CYMR050C FSH3Q99369 266 aa2.41□□□□□ -2.02
YMR050CYMR050C MSB2P32334 1306 aa2.41□□□□□ -2.02
YMR050CYMR050C RPL15AP05748 204 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C HAP3P13434 144 aa2.41□□□□□ -2.02
YMR050CYMR050C MSN1P22148 382 aa2.41□□□□□ -2.02
YMR050CYMR050C HXT2P23585 541 aa2.41□□□□□ -2.02
YMR050CYMR050C GFD2P25370 566 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C CAM1P29547 415 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C GCS1P35197 352 aa2.41□□□□□ -2.02
YMR050CYMR050C SGN1P40561 250 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
YMR050CYMR050C JHD2P47156 728 aaPredicted RBP2.41□□□□□ -2.02
YMR050CYMR050C YGL114WP53134 725 aa2.41□□□□□ -2.02
YMR050CYMR050C RPL15BP54780 204 aaPredicted RBP2.41□□□□□ -2.02
YMR050CYMR050C MRP51Q02950 344 aa2.41□□□□□ -2.02
YMR050CYMR050C YOL114CQ12322 202 aa2.41□□□□□ -2.02
YMR050CYMR050C RMP1Q12530 201 aa2.41□□□□□ -2.02
YMR050CYMR050C RPN13O13563 156 aa2.41□□□□□ -2.02
YMR050CYMR050C ERG11P10614 530 aa2.41□□□□□ -2.02
YMR050CYMR050C YAK1P14680 807 aa2.41□□□□□ -2.02
YMR050CYMR050C RIO2P40160 425 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C SNL1P40548 159 aa2.41□□□□□ -2.02
YMR050CYMR050C MRPL19P53875 158 aa2.41□□□□□ -2.02
YMR050CYMR050C NMA111P53920 997 aa2.41□□□□□ -2.02
YMR050CYMR050C PLB2Q03674 706 aa2.41□□□□□ -2.02
YMR050CYMR050C FMP42Q04991 504 aa2.41□□□□□ -2.02
YMR050CYMR050C YLR031WQ07978 186 aa2.41□□□□□ -2.02
YMR050CYMR050C COQ10Q08058 207 aa2.41□□□□□ -2.02
YMR050CYMR050C CYC1P00044 109 aaPredicted RBP2.41□□□□□ -2.02
YMR050CYMR050C DGR2P32330 852 aa2.41□□□□□ -2.02
YMR050CYMR050C ERG2P32352 222 aa2.41□□□□□ -2.02
YMR050CYMR050C ARO4P32449 370 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C MPE1P35728 441 aaKnown RBP2.41□□□□□ -2.02
YMR050CYMR050C COS9P36034 407 aa2.41□□□□□ -2.02
YMR050CYMR050C YEL073CP39974 107 aa2.41□□□□□ -2.02
YMR050CYMR050C SPC1P46965 94 aa2.41□□□□□ -2.02
YMR050CYMR050C EMC4P53073 190 aa2.41□□□□□ -2.02
YMR050CYMR050C IMO32P53219 342 aa2.41□□□□□ -2.02
YMR050CYMR050C GND2P53319 492 aa2.41□□□□□ -2.02
YMR050CYMR050C ATG4P53867 494 aa2.41□□□□□ -2.02
YMR050CYMR050C RNH201P53942 307 aa2.41□□□□□ -2.02
YMR050CYMR050C YGL041C-BQ3E750 60 aa2.41□□□□□ -2.02
YMR050CYMR050C NAG1Q8TGN9 163 aa2.41□□□□□ -2.02
YMR050CYMR050C RPS17AP02407 136 aaKnown RBP2.4□□□□□ -2.02
YMR050CYMR050C RPP1AP05318 106 aaPredicted RBP2.4□□□□□ -2.02
YMR050CYMR050C RPL43AP0CX25 92 aaKnown RBP2.4□□□□□ -2.02
YMR050CYMR050C RPL43BP0CX26 92 aa2.4□□□□□ -2.02
YMR050CYMR050C RPS17BP14127 136 aaKnown RBP2.4□□□□□ -2.02
YMR050CYMR050C YCK1P23291 538 aa2.4□□□□□ -2.02
YMR050CYMR050C MLF3P32047 452 aa2.4□□□□□ -2.02
YMR050CYMR050C AGA2P32781 87 aa2.4□□□□□ -2.02
YMR050CYMR050C PPG1P32838 368 aa2.4□□□□□ -2.02
YMR050CYMR050C PRS1P32895 427 aaKnown RBP2.4□□□□□ -2.02
YMR050CYMR050C SDH3P33421 198 aa2.4□□□□□ -2.02
YMR050CYMR050C SPO23P33757 523 aa2.4□□□□□ -2.02
YMR050CYMR050C BNA4P38169 460 aa2.4□□□□□ -2.02
YMR050CYMR050C PHO89P38361 574 aa2.4□□□□□ -2.02
YMR050CYMR050C YHR022CP38763 256 aa2.4□□□□□ -2.02
YMR050CYMR050C PHM8P40025 321 aa2.4□□□□□ -2.02
YMR050CYMR050C SWP82P43554 623 aa2.4□□□□□ -2.02
YMR050CYMR050C LSB3P43603 459 aaKnown RBP2.4□□□□□ -2.02
YMR050CYMR050C RPE1P46969 238 aa2.4□□□□□ -2.02
YMR050CYMR050C COG1P53079 417 aa2.4□□□□□ -2.02
YMR050CYMR050C PIR1Q03178 341 aa2.4□□□□□ -2.02
YMR050CYMR050C YAP6Q03935 383 aa2.4□□□□□ -2.02
YMR050CYMR050C PIN3Q06449 215 aa2.4□□□□□ -2.02
YMR050CYMR050C SSK1Q07084 712 aa2.4□□□□□ -2.02
YMR050CYMR050C SWT1Q12104 458 aa2.4□□□□□ -2.02
YMR050CYMR050C YPL150WQ12152 901 aa2.4□□□□□ -2.02
YMR050CYMR050C ISA2Q12425 185 aa2.4□□□□□ -2.02
YMR050CYMR050C YPR145C-AQ2V2P0 78 aa2.4□□□□□ -2.02
YMR050CYMR050C FLO1P32768 1537 aa2.4□□□□□ -2.02
YMR050CYMR050C QCR2P07257 368 aa2.4□□□□□ -2.02
YMR050CYMR050C CLN1P20437 546 aa2.4□□□□□ -2.02
YMR050CYMR050C YCR061WP25639 631 aa2.4□□□□□ -2.02
YMR050CYMR050C CTS1P29029 562 aa2.4□□□□□ -2.02
YMR050CYMR050C MTH1P35198 433 aa2.4□□□□□ -2.02
YMR050CYMR050C MRPL17P36528 281 aa2.4□□□□□ -2.02
YMR050CYMR050C YIL060WP40519 144 aa2.4□□□□□ -2.02
YMR050CYMR050C HMS2P47175 358 aa2.4□□□□□ -2.02
YMR050CYMR050C SIP18P50263 79 aa2.4□□□□□ -2.02
YMR050CYMR050C NBP35P52920 328 aa2.4□□□□□ -2.02
YMR050CYMR050C SGF73P53165 657 aa2.4□□□□□ -2.02
YMR050CYMR050C BUD17P53727 317 aa2.4□□□□□ -2.02
YMR050CYMR050C MPS1P54199 764 aa2.4□□□□□ -2.02
YMR050CYMR050C DAD3P69850 94 aa2.4□□□□□ -2.02
YMR050CYMR050C NUP100Q02629 959 aa2.4□□□□□ -2.02
YMR050CYMR050C ERP1Q05359 219 aaKnown RBP2.4□□□□□ -2.02
YMR050CYMR050C PER33Q12144 273 aa2.4□□□□□ -2.02
YMR050CYMR050C ISN1Q99312 450 aa2.4□□□□□ -2.02
YMR050CYMR050C RPL26AP05743 127 aaKnown RBP2.4□□□□□ -2.03
YMR050CYMR050C CDC21P06785 304 aa2.4□□□□□ -2.03
YMR050CYMR050C ADK1P07170 222 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms