RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	NNT1	Q05874	261 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	GGA1	Q06336	557 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	BCP1	Q06338	283 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YPR091C	Q06833	770 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	LOT6	Q07923	191 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	RAX1	Q08760	435 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	RRI2	Q12348	645 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	ORT1	Q12375	292 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	ISN1	Q99312	450 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	SSA3	P09435	649 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	SCL1	P21243	252 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	AAT2	P23542	418 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	ERG9	P29704	444 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	LHP1	P33399	275 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	AST1	P35183	429 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	RPC25	P35718	212 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	MRP21	P38175	177 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YRB1	P41920	201 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	GLR1	P41921	483 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	YML6	P51998	286 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	RSM27	P53305	110 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	APJ1	P53940	528 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YDR222W	Q04925	415 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YPR172W	Q06608	200 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	DTD1	Q07648	150 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	RLP24	Q07915	199 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	RKM1	Q08961	583 aa	Predicted RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	RPN5	Q12250	445 aa	Known RBP	0.77	□□□□□ -2.29
PRP16	YKR086W	JID1	Q12350	301 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	BBP1	Q12365	385 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	YPR064W	Q12492	139 aa		0.77	□□□□□ -2.29
PRP16	YKR086W	COX5A	P00424	153 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	IMA3	P0CW40	589 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	IMA4	P0CW41	589 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	DCC1	P25559	380 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	NIP1	P32497	812 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	PRP21	P32524	280 aa	Predicted RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	GYP6	P32806	458 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	CSE2	P33308	149 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	CAF4	P36130	643 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YGP1	P38616	354 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	PEX22	P39718	180 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	HEM14	P40012	539 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	OSW5	P40219	148 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	BTT1	P40314	149 aa	Predicted RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	SOK1	P40317	901 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	ZRG17	P53735	605 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YNR062C	P53748	327 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	ACL4	Q03771	387 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	RVB1	Q03940	463 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	ECM11	Q04110	302 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	IMA2	Q08295	589 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YDL109C	Q12103	647 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YDR018C	Q12185	396 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	LDB17	Q12342	491 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	BEM2	P39960	2167 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	ADE4	P04046	510 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	RAD3	P06839	778 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	MATALPHA2	P0CY08	210 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	HMLALPHA2	P0CY09	210 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	ARF2	P19146	181 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	EFB1	P32471	206 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	SMF2	P38778	549 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	FET3	P38993	636 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	IRC6	P43615	237 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YJR011C	P47086	261 aa	Predicted RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	SLX9	P53251	210 aa	Predicted RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	CLD1	P53264	445 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	SUR7	P54003	302 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	SLT2	Q00772	484 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	FUS2	Q05670	677 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	ECM7	Q06200	448 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	PIN3	Q06449	215 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	PML1	Q07930	204 aa	Predicted RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	YCR024C-B	Q3E7Z8	88 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	RPL18A	P0CX49	186 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	RPL18B	P0CX50	186 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	RNA1	P11745	407 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	OM45	P16547	393 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	RRT12	P25381	491 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	CDC50	P25656	391 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	CDC13	P32797	924 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	PRX1	P34227	261 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	FZO1	P38297	855 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	MIG3	P39943	394 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	SCC4	P40090	624 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	PRE6	P40303	254 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	ILM1	P47155	203 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	MND1	P53102	219 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YNL095C	P53932	642 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	TPS1	Q00764	495 aa	Known RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	RPA49	Q01080	415 aa	Predicted RBP	0.76	□□□□□ -2.29
PRP16	YKR086W	YMR102C	Q03177	834 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	ABZ2	Q03266	374 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	CAB5	Q03941	241 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	BCH1	Q05029	724 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	YDR286C	Q05530	114 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	MFG1	Q07684	458 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	SCM3	Q12334	223 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	RRP36	Q12481	300 aa	Predicted RBP	0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 89.6 ms