RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YBR096WP38256 230 aa10.14□□□□□ -0.79
YKR040CYKR040C SSZ1P38788 538 aaKnown RBP10.14□□□□□ -0.79
YKR040CYKR040C IPT1P38954 527 aa10.14□□□□□ -0.79
YKR040CYKR040C PIG2P40187 538 aa10.14□□□□□ -0.79
YKR040CYKR040C GAT2P40209 560 aa10.14□□□□□ -0.79
YKR040CYKR040C PDS1P40316 373 aaPredicted RBP10.14□□□□□ -0.79
YKR040CYKR040C ASI3P53983 676 aa10.14□□□□□ -0.79
YKR040CYKR040C PET191Q02772 108 aa10.14□□□□□ -0.79
YKR040CYKR040C YMR087WQ04299 284 aa10.14□□□□□ -0.79
YKR040CYKR040C THI72Q08579 599 aa10.14□□□□□ -0.79
YKR040CYKR040C FIT3Q08907 204 aa10.14□□□□□ -0.79
YKR040CYKR040C RNH203Q12338 110 aa10.14□□□□□ -0.79
YKR040CYKR040C SCEIP03882 235 aa10.13□□□□□ -0.79
YKR040CYKR040C MEK1P24719 497 aaPredicted RBP10.13□□□□□ -0.79
YKR040CYKR040C ERG4P25340 473 aa10.13□□□□□ -0.79
YKR040CYKR040C ECT1P33412 323 aa10.13□□□□□ -0.79
YKR040CYKR040C MIA40P36046 403 aa10.13□□□□□ -0.79
YKR040CYKR040C SHE1P38200 338 aa10.13□□□□□ -0.79
YKR040CYKR040C SDP1P40479 209 aa10.13□□□□□ -0.79
YKR040CYKR040C MSS2P40990 351 aa10.13□□□□□ -0.79
YKR040CYKR040C RMD9P53140 646 aaKnown RBP10.13□□□□□ -0.79
YKR040CYKR040C YLR346CQ06139 101 aa10.13□□□□□ -0.79
YKR040CYKR040C RSC58Q07979 502 aa10.13□□□□□ -0.79
YKR040CYKR040C RKM1Q08961 583 aaPredicted RBP10.13□□□□□ -0.79
YKR040CYKR040C VCX1Q99385 411 aa10.13□□□□□ -0.79
YKR040CYKR040C CLB2P24869 491 aa10.12□□□□□ -0.79
YKR040CYKR040C TIF3P34167 436 aaKnown RBP10.12□□□□□ -0.79
YKR040CYKR040C YKL187CP34231 750 aa10.12□□□□□ -0.79
YKR040CYKR040C BUR6P40096 142 aa10.12□□□□□ -0.79
YKR040CYKR040C YJL055WP47044 245 aa10.12□□□□□ -0.79
YKR040CYKR040C MTM1P53320 366 aa10.12□□□□□ -0.79
YKR040CYKR040C ARP10Q04549 284 aa10.12□□□□□ -0.79
YKR040CYKR040C RNH1Q04740 348 aa10.12□□□□□ -0.79
YKR040CYKR040C YOR378WQ08902 515 aa10.12□□□□□ -0.79
YKR040CYKR040C COX5BP00425 151 aa10.11□□□□□ -0.79
YKR040CYKR040C PCL1P24867 279 aa10.11□□□□□ -0.79
YKR040CYKR040C DBF20P32328 564 aa10.11□□□□□ -0.79
YKR040CYKR040C LOH1P47055 219 aa10.11□□□□□ -0.79
YKR040CYKR040C SAY1P53324 424 aa10.11□□□□□ -0.79
YKR040CYKR040C INN1P53901 409 aa10.11□□□□□ -0.79
YKR040CYKR040C MRX8Q05473 314 aa10.11□□□□□ -0.79
YKR040CYKR040C PML1Q07930 204 aaPredicted RBP10.11□□□□□ -0.79
YKR040CYKR040C YGK3Q12222 375 aaPredicted RBP10.11□□□□□ -0.79
YKR040CYKR040C TRM10Q12400 293 aa10.11□□□□□ -0.79
YKR040CYKR040C YBL029C-AQ3E756 94 aa10.11□□□□□ -0.79
YKR040CYKR040C MED11Q99278 115 aa10.11□□□□□ -0.79
YKR040CYKR040C YGL041W-AP0C5N3 154 aa10.1□□□□□ -0.79
YKR040CYKR040C CLB6P32943 380 aa10.1□□□□□ -0.79
YKR040CYKR040C BCK2P33306 851 aa10.1□□□□□ -0.79
YKR040CYKR040C CLG1P35190 452 aa10.1□□□□□ -0.79
YKR040CYKR040C YPK3P38070 525 aa10.1□□□□□ -0.79
YKR040CYKR040C QRI1P43123 477 aaKnown RBP10.1□□□□□ -0.79
YKR040CYKR040C CRZ1P53968 678 aa10.1□□□□□ -0.79
YKR040CYKR040C RSM28Q03430 361 aa10.1□□□□□ -0.79
YKR040CYKR040C RPA135P22138 1203 aaKnown RBP10.09□□□□□ -0.79
YKR040CYKR040C BOS1P25385 244 aa10.09□□□□□ -0.79
YKR040CYKR040C DTR1P38125 572 aa10.09□□□□□ -0.79
YKR040CYKR040C QDR1P40475 563 aa10.09□□□□□ -0.79
YKR040CYKR040C GVP36P40531 326 aaKnown RBP10.09□□□□□ -0.79
YKR040CYKR040C TIR3P40552 269 aa10.09□□□□□ -0.79
YKR040CYKR040C UBC13P52490 153 aa10.09□□□□□ -0.79
YKR040CYKR040C YPL077CQ02831 240 aa10.09□□□□□ -0.79
YKR040CYKR040C DIG2Q03373 323 aaKnown RBP10.09□□□□□ -0.79
YKR040CYKR040C BRE4Q07660 1125 aa10.09□□□□□ -0.79
YKR040CYKR040C THP3Q12049 470 aaKnown RBP10.09□□□□□ -0.79
YKR040CYKR040C PDE2P06776 526 aa10.08□□□□□ -0.8
YKR040CYKR040C NAB2P32505 525 aaKnown RBP RIP-Chip data10.08□□□□□ -0.8not detected
YKR040CYKR040C SDS22P36047 338 aa10.08□□□□□ -0.8
YKR040CYKR040C APL3P38065 1025 aa10.08□□□□□ -0.8
YKR040CYKR040C FMC1P40491 155 aa10.08□□□□□ -0.8
YKR040CYKR040C RSM23Q01163 450 aa10.08□□□□□ -0.8
YKR040CYKR040C SKO1Q02100 647 aa10.08□□□□□ -0.8
YKR040CYKR040C RBS1Q05672 457 aaKnown RBP10.08□□□□□ -0.8
YKR040CYKR040C GSH2Q08220 491 aa10.08□□□□□ -0.8
YKR040CYKR040C DBF2P22204 572 aa10.07□□□□□ -0.8
YKR040CYKR040C ANR2P36090 516 aaPredicted RBP10.07□□□□□ -0.8
YKR040CYKR040C NTA1P40354 457 aa10.07□□□□□ -0.8
YKR040CYKR040C AAD14P42884 376 aa10.07□□□□□ -0.8
YKR040CYKR040C CCC1P47818 322 aa10.07□□□□□ -0.8
YKR040CYKR040C PPT1P53043 513 aa10.07□□□□□ -0.8
YKR040CYKR040C LAP3Q01532 483 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
YKR040CYKR040C YLR173WQ06247 608 aa10.07□□□□□ -0.8
YKR040CYKR040C NOP56Q12460 504 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
YKR040CYKR040C MET17P06106 444 aa10.06□□□□□ -0.8
YKR040CYKR040C ENA1P13587 1091 aa10.06□□□□□ -0.8
YKR040CYKR040C PUT3P25502 979 aaPredicted RBP10.06□□□□□ -0.8
YKR040CYKR040C SPC29P33419 253 aa10.06□□□□□ -0.8
YKR040CYKR040C RSM22P36056 628 aa10.06□□□□□ -0.8
YKR040CYKR040C BAP2P38084 609 aa10.06□□□□□ -0.8
YKR040CYKR040C MED8P38304 223 aa10.06□□□□□ -0.8
YKR040CYKR040C AVT6P40074 448 aa10.06□□□□□ -0.8
YKR040CYKR040C YIL029CP40538 142 aa10.06□□□□□ -0.8
YKR040CYKR040C GDS1P41913 522 aa10.06□□□□□ -0.8
YKR040CYKR040C YIP5P53108 310 aa10.06□□□□□ -0.8
YKR040CYKR040C DMA2P53924 522 aa10.06□□□□□ -0.8
YKR040CYKR040C ENA2Q01896 1091 aa10.06□□□□□ -0.8
YKR040CYKR040C NOG1Q02892 647 aaKnown RBP10.06□□□□□ -0.8
YKR040CYKR040C YDR391CQ04170 232 aa10.06□□□□□ -0.8
YKR040CYKR040C YTH1Q06102 208 aaPredicted RBP10.06□□□□□ -0.8
YKR040CYKR040C TMC1Q08422 150 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms