RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SET3	YKR029C	YPL077C	Q02831	240 aa		0.98	□□□□□ -2.25
SET3	YKR029C	SCS7	Q03529	384 aa		0.98	□□□□□ -2.25
SET3	YKR029C	INP1	Q03694	420 aa		0.98	□□□□□ -2.25
SET3	YKR029C	INP2	Q03824	705 aa		0.98	□□□□□ -2.25
SET3	YKR029C	BER1	Q06688	274 aa	Known RBP	0.98	□□□□□ -2.25
SET3	YKR029C	APC9	Q12107	265 aa		0.98	□□□□□ -2.25
SET3	YKR029C	RAX2	Q12465	1220 aa		0.98	□□□□□ -2.25
SET3	YKR029C	LAG2	Q92325	660 aa		0.98	□□□□□ -2.25
SET3	YKR029C	BI3	Q9ZZW7	517 aa		0.98	□□□□□ -2.25
SET3	YKR029C	AUS1	Q08409	1394 aa		0.98	□□□□□ -2.25
SET3	YKR029C	YRF1-2	P40105	1681 aa		0.98	□□□□□ -2.25
SET3	YKR029C	NUP188	P52593	1655 aa	Known RBP	0.98	□□□□□ -2.25
SET3	YKR029C	YPR117W	Q06116	2489 aa		0.98	□□□□□ -2.25
SET3	YKR029C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
SET3	YKR029C	MRPL6	P32904	214 aa		0.98	□□□□□ -2.25
SET3	YKR029C	RCK1	P38622	512 aa		0.98	□□□□□ -2.25
SET3	YKR029C	FRT2	P39734	528 aa		0.98	□□□□□ -2.25
SET3	YKR029C	SLM1	P40485	686 aa		0.98	□□□□□ -2.25
SET3	YKR029C	GPI8	P49018	411 aa		0.98	□□□□□ -2.25
SET3	YKR029C	PNC1	P53184	216 aa	Known RBP	0.98	□□□□□ -2.25
SET3	YKR029C	TPC1	P53257	314 aa		0.98	□□□□□ -2.25
SET3	YKR029C	YNL050C	P53952	270 aa		0.98	□□□□□ -2.25
SET3	YKR029C	ERV25	P54837	211 aa	Known RBP	0.98	□□□□□ -2.25
SET3	YKR029C	GMC1	Q04399	608 aa		0.98	□□□□□ -2.25
SET3	YKR029C	ERV41	Q04651	352 aa		0.98	□□□□□ -2.25
SET3	YKR029C	YPR064W	Q12492	139 aa		0.98	□□□□□ -2.25
SET3	YKR029C	YAL067W-A	Q8TGK6	75 aa		0.98	□□□□□ -2.25
SET3	YKR029C	ILV1	P00927	576 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	RPL31A	P0C2H8	113 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	FUS3	P16892	353 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	GPI12	P23797	304 aa		0.97	□□□□□ -2.25
SET3	YKR029C	GCG1	P32656	232 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	SKG6	P32900	734 aa	Predicted RBP	0.97	□□□□□ -2.25
SET3	YKR029C	CSE1	P33307	960 aa		0.97	□□□□□ -2.25
SET3	YKR029C	YKL063C	P35725	167 aa		0.97	□□□□□ -2.25
SET3	YKR029C	MCH2	P36032	473 aa		0.97	□□□□□ -2.25
SET3	YKR029C	AIM29	P36154	155 aa		0.97	□□□□□ -2.25
SET3	YKR029C	HIS2	P38635	335 aa		0.97	□□□□□ -2.25
SET3	YKR029C	VPS45	P38932	577 aa		0.97	□□□□□ -2.25
SET3	YKR029C	MRX5	P47007	382 aa		0.97	□□□□□ -2.25
SET3	YKR029C	MPP10	P47083	593 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	EMC2	P47133	292 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	YGL118C	P53132	145 aa		0.97	□□□□□ -2.25
SET3	YKR029C	BIO4	P53630	237 aa		0.97	□□□□□ -2.25
SET3	YKR029C	YNR066C	P53752	436 aa		0.97	□□□□□ -2.25
SET3	YKR029C	ARC18	Q05933	178 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	YLR446W	Q06204	433 aa		0.97	□□□□□ -2.25
SET3	YKR029C	PIN3	Q06449	215 aa		0.97	□□□□□ -2.25
SET3	YKR029C	ASR1	Q06834	288 aa		0.97	□□□□□ -2.25
SET3	YKR029C	IES4	Q08561	116 aa		0.97	□□□□□ -2.25
SET3	YKR029C	YDR018C	Q12185	396 aa		0.97	□□□□□ -2.25
SET3	YKR029C	TIR4	Q12218	487 aa	Predicted RBP	0.97	□□□□□ -2.25
SET3	YKR029C	TRM10	Q12400	293 aa		0.97	□□□□□ -2.25
SET3	YKR029C	MRPL23	Q12487	163 aa	Predicted RBP	0.97	□□□□□ -2.25
SET3	YKR029C	GCN2	P15442	1659 aa		0.97	□□□□□ -2.25
SET3	YKR029C	FLO11	P08640	1367 aa		0.97	□□□□□ -2.25
SET3	YKR029C	PDR5	P33302	1511 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.97	□□□□□ -2.25
SET3	YKR029C	HPR1	P17629	752 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	DBP3	P20447	523 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	CDC13	P32797	924 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	CYM1	P32898	989 aa		0.96	□□□□□ -2.26
SET3	YKR029C	ZRT3	P34240	503 aa		0.96	□□□□□ -2.26
SET3	YKR029C	TPO5	P36029	618 aa		0.96	□□□□□ -2.26
SET3	YKR029C	RPC37	P36121	282 aa		0.96	□□□□□ -2.26
SET3	YKR029C	TRR2	P38816	342 aa		0.96	□□□□□ -2.26
SET3	YKR029C	RTT105	P40063	208 aa		0.96	□□□□□ -2.26
SET3	YKR029C	AGP3	P43548	558 aa		0.96	□□□□□ -2.26
SET3	YKR029C	ASG7	P46993	209 aa		0.96	□□□□□ -2.26
SET3	YKR029C	UBC13	P52490	153 aa		0.96	□□□□□ -2.26
SET3	YKR029C	MND1	P53102	219 aa		0.96	□□□□□ -2.26
SET3	YKR029C	CAX4	P53223	239 aa		0.96	□□□□□ -2.26
SET3	YKR029C	YMR209C	Q03648	457 aa		0.96	□□□□□ -2.26
SET3	YKR029C	VTI1	Q04338	217 aa		0.96	□□□□□ -2.26
SET3	YKR029C	YMR111C	Q04461	462 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	GEA1	P47102	1408 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	SAL1	D6W196	494 aa		0.96	□□□□□ -2.26
SET3	YKR029C	ATP6	P00854	259 aa		0.96	□□□□□ -2.26
SET3	YKR029C	RPL24A	P04449	155 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	SSA3	P09435	649 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	OM45	P16547	393 aa		0.96	□□□□□ -2.26
SET3	YKR029C	VPS1	P21576	704 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	YSR3	P23501	404 aa		0.96	□□□□□ -2.26
SET3	YKR029C	MEK1	P24719	497 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	VPH2	P32341	215 aa		0.96	□□□□□ -2.26
SET3	YKR029C	DBP7	P36120	742 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	YPC1	P38298	316 aa		0.96	□□□□□ -2.26
SET3	YKR029C	PET8	P38921	284 aa		0.96	□□□□□ -2.26
SET3	YKR029C	ASP1	P38986	381 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	BDH1	P39714	382 aa		0.96	□□□□□ -2.26
SET3	YKR029C	EDC2	P40023	145 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	KRE29	P40026	464 aa		0.96	□□□□□ -2.26
SET3	YKR029C	GCD14	P46959	383 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	LIF1	P53150	421 aa		0.96	□□□□□ -2.26
SET3	YKR029C	COG7	P53195	279 aa		0.96	□□□□□ -2.26
SET3	YKR029C	RNY1	Q02933	434 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	SEC13	Q04491	297 aa	Known RBP	0.96	□□□□□ -2.26
SET3	YKR029C	ECM18	Q04623	453 aa		0.96	□□□□□ -2.26
SET3	YKR029C	DIB1	Q06819	143 aa	Predicted RBP	0.96	□□□□□ -2.26
SET3	YKR029C	POM33	Q12164	279 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms