RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W AVT7P40501 490 aa3.24□□□□□ -1.89
NSP1YJL041W ERR3P42222 437 aa3.24□□□□□ -1.89
NSP1YJL041W CAK1P43568 368 aaPredicted RBP3.24□□□□□ -1.89
NSP1YJL041W YAR1P46683 200 aa3.24□□□□□ -1.89
NSP1YJL041W RPS12P48589 143 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W SGF73P53165 657 aa3.24□□□□□ -1.89
NSP1YJL041W PRP38Q00723 242 aaPredicted RBP3.24□□□□□ -1.89
NSP1YJL041W NUP49Q02199 472 aa3.24□□□□□ -1.89
NSP1YJL041W YDR132CQ03900 495 aa3.24□□□□□ -1.89
NSP1YJL041W RAD34Q06665 692 aa3.24□□□□□ -1.89
NSP1YJL041W SSK1Q07084 712 aa3.24□□□□□ -1.89
NSP1YJL041W YPL245WQ12179 454 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W FRE8Q12209 686 aa3.24□□□□□ -1.89
NSP1YJL041W YCT1Q12235 531 aa3.24□□□□□ -1.89
NSP1YJL041W YLR126CQ12288 251 aa3.24□□□□□ -1.89
NSP1YJL041W PDH1Q12428 516 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W KCS1Q12494 1050 aa3.24□□□□□ -1.89
NSP1YJL041W TMA17Q12513 150 aa3.24□□□□□ -1.89
NSP1YJL041W RPS9BP05755 195 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W ADH3P07246 375 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W SEC12P11655 471 aa3.24□□□□□ -1.89
NSP1YJL041W TAH1P25638 111 aaPredicted RBP3.24□□□□□ -1.89
NSP1YJL041W ACB1P31787 87 aa3.24□□□□□ -1.89
NSP1YJL041W SEC17P32602 292 aa3.24□□□□□ -1.89
NSP1YJL041W UTR4P32626 227 aa3.24□□□□□ -1.89
NSP1YJL041W ZRT3P34240 503 aa3.24□□□□□ -1.89
NSP1YJL041W HSL7P38274 827 aa3.24□□□□□ -1.89
NSP1YJL041W YPC1P38298 316 aa3.24□□□□□ -1.89
NSP1YJL041W YBR220CP38318 560 aa3.24□□□□□ -1.89
NSP1YJL041W PCM1P38628 557 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W MDM31P38880 579 aa3.24□□□□□ -1.89
NSP1YJL041W CKB2P38930 258 aa3.24□□□□□ -1.89
NSP1YJL041W YEA6P39953 335 aa3.24□□□□□ -1.89
NSP1YJL041W YER085CP40058 173 aa3.24□□□□□ -1.89
NSP1YJL041W GAT2P40209 560 aa3.24□□□□□ -1.89
NSP1YJL041W BMT5P40493 336 aa3.24□□□□□ -1.89
NSP1YJL041W CAT5P41735 233 aa3.24□□□□□ -1.89
NSP1YJL041W GSM1P42950 618 aa3.24□□□□□ -1.89
NSP1YJL041W YFL054CP43549 646 aa3.24□□□□□ -1.89
NSP1YJL041W IKS1P47042 667 aa3.24□□□□□ -1.89
NSP1YJL041W AIM22P47051 409 aa3.24□□□□□ -1.89
NSP1YJL041W MNN10P50108 393 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W FLC3P53121 802 aa3.24□□□□□ -1.89
NSP1YJL041W ERV29P53337 310 aa3.24□□□□□ -1.89
NSP1YJL041W YDR366CP87287 132 aa3.24□□□□□ -1.89
NSP1YJL041W TPO1Q07824 586 aa3.24□□□□□ -1.89
NSP1YJL041W YTM1Q12024 460 aaPredicted RBP3.24□□□□□ -1.89
NSP1YJL041W NMD4Q12129 218 aa3.24□□□□□ -1.89
NSP1YJL041W PST2Q12335 198 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W AHA1Q12449 350 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W AIM45Q12480 344 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W FOL3Q12676 427 aaPredicted RBP3.24□□□□□ -1.89
NSP1YJL041W DIF1O13577 133 aa3.23□□□□□ -1.89
NSP1YJL041W TDH2P00358 332 aaKnown RBP3.23□□□□□ -1.89
NSP1YJL041W TDH3P00359 332 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
NSP1YJL041W MSW1P04803 379 aa3.23□□□□□ -1.89
NSP1YJL041W SCH9P11792 824 aaKnown RBP3.23□□□□□ -1.89
NSP1YJL041W CBS1P14066 229 aa3.23□□□□□ -1.89
NSP1YJL041W CBS2P14905 389 aa3.23□□□□□ -1.89
NSP1YJL041W MAG1P22134 296 aaKnown RBP3.23□□□□□ -1.89
NSP1YJL041W STP22P25604 385 aa3.23□□□□□ -1.89
NSP1YJL041W PMI40P29952 429 aaKnown RBP3.23□□□□□ -1.89
NSP1YJL041W YKL102CP34249 101 aa3.23□□□□□ -1.89
NSP1YJL041W RIB1P38066 345 aa3.23□□□□□ -1.89
NSP1YJL041W TRS20P38334 175 aa3.23□□□□□ -1.89
NSP1YJL041W FAD1P38913 306 aa3.23□□□□□ -1.89
NSP1YJL041W PRM2P40534 656 aa3.23□□□□□ -1.89
NSP1YJL041W SSU1P41930 458 aa3.23□□□□□ -1.89
NSP1YJL041W PMT6P42934 759 aa3.23□□□□□ -1.89
NSP1YJL041W MTR3P48240 250 aaPredicted RBP3.23□□□□□ -1.89
NSP1YJL041W MGA1P53050 456 aa3.23□□□□□ -1.89
NSP1YJL041W MDM34P53083 459 aa3.23□□□□□ -1.89
NSP1YJL041W YAT1P80235 687 aa3.23□□□□□ -1.89
NSP1YJL041W UBP16Q02863 499 aa3.23□□□□□ -1.89
NSP1YJL041W FIT1Q04433 528 aa3.23□□□□□ -1.89
NSP1YJL041W RIF2Q06208 395 aa3.23□□□□□ -1.89
NSP1YJL041W TCO89Q08921 799 aa3.23□□□□□ -1.89
NSP1YJL041W GEP5Q12393 293 aa3.23□□□□□ -1.89
NSP1YJL041W CYC7P00045 113 aa3.22□□□□□ -1.89
NSP1YJL041W RPL9AP05738 191 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W RPS24AP0CX31 135 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W RPS24BP0CX32 135 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W ART10P18634 518 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W ZRC1P20107 442 aa3.22□□□□□ -1.89
NSP1YJL041W EMP24P32803 203 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W LIP5P32875 414 aa3.22□□□□□ -1.89
NSP1YJL041W FRE2P36033 711 aa3.22□□□□□ -1.89
NSP1YJL041W SDH4P37298 181 aa3.22□□□□□ -1.89
NSP1YJL041W DTR1P38125 572 aa3.22□□□□□ -1.89
NSP1YJL041W DER1P38307 211 aa3.22□□□□□ -1.89
NSP1YJL041W YHL041WP38730 149 aa3.22□□□□□ -1.89
NSP1YJL041W YHR127WP38833 243 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W ALP1P38971 573 aa3.22□□□□□ -1.89
NSP1YJL041W MOB1P40484 314 aa3.22□□□□□ -1.89
NSP1YJL041W TIR3P40552 269 aa3.22□□□□□ -1.89
NSP1YJL041W SHR5P41912 237 aa3.22□□□□□ -1.89
NSP1YJL041W GZF3P42944 551 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W GWT1P47026 490 aa3.22□□□□□ -1.89
NSP1YJL041W BUL1P48524 976 aa3.22□□□□□ -1.89
NSP1YJL041W ASN1P49089 572 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms