RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C SLM2P53955 656 aa3.45□□□□□ -1.86
PXR1YGR280C YMR010WQ03687 405 aa3.45□□□□□ -1.86
PXR1YGR280C YDR391CQ04170 232 aa3.45□□□□□ -1.86
PXR1YGR280C YMR087WQ04299 284 aa3.45□□□□□ -1.86
PXR1YGR280C UTP15Q04305 513 aaKnown RBP3.45□□□□□ -1.86
PXR1YGR280C LOT6Q07923 191 aa3.45□□□□□ -1.86
PXR1YGR280C DIA2Q08496 732 aaPredicted RBP3.45□□□□□ -1.86
PXR1YGR280C ENV7Q12003 364 aa3.45□□□□□ -1.86
PXR1YGR280C SNF8Q12483 233 aa3.45□□□□□ -1.86
PXR1YGR280C MRPL23Q12487 163 aaPredicted RBP3.45□□□□□ -1.86
PXR1YGR280C YOL087CQ99247 1116 aa3.45□□□□□ -1.86
PXR1YGR280C RAD7P06779 565 aa3.44□□□□□ -1.86
PXR1YGR280C RHO2P06781 192 aa3.44□□□□□ -1.86
PXR1YGR280C HEM15P16622 393 aa3.44□□□□□ -1.86
PXR1YGR280C MDM10P18409 493 aa3.44□□□□□ -1.86
PXR1YGR280C RNA14P25298 677 aaKnown RBP3.44□□□□□ -1.86
PXR1YGR280C TOA1P32773 286 aa3.44□□□□□ -1.86
PXR1YGR280C YKR015CP36111 568 aa3.44□□□□□ -1.86
PXR1YGR280C SDH4P37298 181 aa3.44□□□□□ -1.86
PXR1YGR280C BIO4P53630 237 aa3.44□□□□□ -1.86
PXR1YGR280C ARC35P53731 342 aaKnown RBP3.44□□□□□ -1.86
PXR1YGR280C YDC1Q02896 317 aa3.44□□□□□ -1.86
PXR1YGR280C GRH1Q04410 372 aaKnown RBP3.44□□□□□ -1.86
PXR1YGR280C GSH2Q08220 491 aa3.44□□□□□ -1.86
PXR1YGR280C YLR125WQ12138 136 aa3.44□□□□□ -1.86
PXR1YGR280C SAL1D6W196 494 aa3.43□□□□□ -1.86
PXR1YGR280C ARG3P05150 338 aa3.43□□□□□ -1.86
PXR1YGR280C RPP2AP05319 106 aaKnown RBP3.43□□□□□ -1.86
PXR1YGR280C SGA1P08019 549 aa3.43□□□□□ -1.86
PXR1YGR280C DSF1P0CX08 502 aa3.43□□□□□ -1.86
PXR1YGR280C YNR073CP0CX09 502 aa3.43□□□□□ -1.86
PXR1YGR280C RPL3P14126 387 aaKnown RBP3.43□□□□□ -1.86
PXR1YGR280C YPK2P18961 677 aa3.43□□□□□ -1.86
PXR1YGR280C MRPL25P23369 157 aa3.43□□□□□ -1.86
PXR1YGR280C POL4P25615 582 aa3.43□□□□□ -1.86
PXR1YGR280C MTH1P35198 433 aa3.43□□□□□ -1.86
PXR1YGR280C CAF4P36130 643 aa3.43□□□□□ -1.86
PXR1YGR280C BIG1P38813 335 aa3.43□□□□□ -1.86
PXR1YGR280C YER184CP39961 794 aa3.43□□□□□ -1.86
PXR1YGR280C YNL195CP40168 261 aa3.43□□□□□ -1.86
PXR1YGR280C GAT4P40569 121 aa3.43□□□□□ -1.86
PXR1YGR280C PTR3P43606 678 aa3.43□□□□□ -1.86
PXR1YGR280C APT1P49435 187 aaKnown RBP3.43□□□□□ -1.86
PXR1YGR280C NAS6P50086 228 aa3.43□□□□□ -1.86
PXR1YGR280C GET1P53192 235 aa3.43□□□□□ -1.86
PXR1YGR280C YNL058CP53947 316 aa3.43□□□□□ -1.86
PXR1YGR280C YKR011CQ02209 353 aa3.43□□□□□ -1.86
PXR1YGR280C KRE28Q04431 385 aa3.43□□□□□ -1.86
PXR1YGR280C YDR114CQ04597 100 aa3.43□□□□□ -1.86
PXR1YGR280C ARR2Q06597 130 aa3.43□□□□□ -1.86
PXR1YGR280C OPI3P05375 206 aa3.42□□□□□ -1.86
PXR1YGR280C PUT2P07275 575 aa3.42□□□□□ -1.86
PXR1YGR280C YJL197C-AP0C5P0 93 aa3.42□□□□□ -1.86
PXR1YGR280C PHO85P17157 305 aa3.42□□□□□ -1.86
PXR1YGR280C TOM40P23644 387 aaKnown RBP3.42□□□□□ -1.86
PXR1YGR280C YCR100CP25606 316 aa3.42□□□□□ -1.86
PXR1YGR280C FEN2P25621 512 aaKnown RBP3.42□□□□□ -1.86
PXR1YGR280C TRS65P32893 560 aa3.42□□□□□ -1.86
PXR1YGR280C MFT1P33441 392 aaKnown RBP3.42□□□□□ -1.86
PXR1YGR280C JEN1P36035 616 aa3.42□□□□□ -1.86
PXR1YGR280C ARN1P38731 627 aa3.42□□□□□ -1.86
PXR1YGR280C PFS2P42841 465 aaKnown RBP3.42□□□□□ -1.86
PXR1YGR280C TWF1P53250 332 aa3.42□□□□□ -1.86
PXR1YGR280C YML119WQ03208 357 aa3.42□□□□□ -1.86
PXR1YGR280C MER1P16523 270 aa3.41□□□□□ -1.86
PXR1YGR280C DBP3P20447 523 aaKnown RBP3.41□□□□□ -1.86
PXR1YGR280C CLB3P24870 427 aa3.41□□□□□ -1.86
PXR1YGR280C SNC1P31109 117 aa3.41□□□□□ -1.86
PXR1YGR280C TIM12P32830 109 aa3.41□□□□□ -1.86
PXR1YGR280C PPZ2P33329 710 aa3.41□□□□□ -1.86
PXR1YGR280C BYE1P36106 594 aa3.41□□□□□ -1.86
PXR1YGR280C DDI1P40087 428 aa3.41□□□□□ -1.86
PXR1YGR280C ARC1P46672 376 aaKnown RBP3.41□□□□□ -1.86
PXR1YGR280C YGL114WP53134 725 aa3.41□□□□□ -1.86
PXR1YGR280C MPP6P53725 186 aaPredicted RBP3.41□□□□□ -1.86
PXR1YGR280C LRS4Q04087 347 aaKnown RBP3.41□□□□□ -1.86
PXR1YGR280C SYO1Q07395 620 aa3.41□□□□□ -1.86
PXR1YGR280C YDL121CQ07541 149 aa3.41□□□□□ -1.86
PXR1YGR280C TDH2P00358 332 aaKnown RBP3.4□□□□□ -1.87
PXR1YGR280C TDH3P00359 332 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
PXR1YGR280C VPH2P32341 215 aa3.4□□□□□ -1.87
PXR1YGR280C VPS17P32913 551 aa3.4□□□□□ -1.87
PXR1YGR280C MSN4P33749 630 aa3.4□□□□□ -1.87
PXR1YGR280C PAD1P33751 242 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
PXR1YGR280C GDI1P39958 451 aaKnown RBP3.4□□□□□ -1.87
PXR1YGR280C YIL166CP40445 542 aa3.4□□□□□ -1.87
PXR1YGR280C URM1P40554 99 aaPredicted RBP3.4□□□□□ -1.87
PXR1YGR280C NAS2P40555 220 aa3.4□□□□□ -1.87
PXR1YGR280C MET28P40573 187 aa3.4□□□□□ -1.87
PXR1YGR280C YNL320WP42840 284 aa3.4□□□□□ -1.87
PXR1YGR280C SOL1P50278 321 aa3.4□□□□□ -1.87
PXR1YGR280C CAB4P53332 305 aa3.4□□□□□ -1.87
PXR1YGR280C GPI17Q04080 534 aa3.4□□□□□ -1.87
PXR1YGR280C AIM6Q07716 390 aa3.4□□□□□ -1.87
PXR1YGR280C MIM1Q08176 113 aa3.4□□□□□ -1.87
PXR1YGR280C UAF30Q08747 228 aa3.4□□□□□ -1.87
PXR1YGR280C COX2P00410 251 aa3.39□□□□□ -1.87
PXR1YGR280C MSW1P04803 379 aa3.39□□□□□ -1.87
PXR1YGR280C BOS1P25385 244 aa3.39□□□□□ -1.87
PXR1YGR280C PPA2P28239 310 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms