RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W MLH1P38920 769 aa6□□□□□ -1.45
NUP49YGL172W GPP2P40106 250 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W RIO2P40160 425 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W ADO1P47143 340 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W MSY1P48527 492 aa6□□□□□ -1.45
NUP49YGL172W KAP120Q02932 1032 aa6□□□□□ -1.45
NUP49YGL172W SPO19Q03029 223 aa6□□□□□ -1.45
NUP49YGL172W RSM24Q03976 319 aa6□□□□□ -1.45
NUP49YGL172W ARP10Q04549 284 aa6□□□□□ -1.45
NUP49YGL172W YMR315WQ04869 349 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W HRI1Q05905 244 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W ATG17Q06410 417 aa6□□□□□ -1.45
NUP49YGL172W RRP9Q06506 573 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W NIP7Q08962 181 aaKnown RBP6□□□□□ -1.45
NUP49YGL172W GRE1Q08969 168 aa6□□□□□ -1.45
NUP49YGL172W VCX1Q99385 411 aa6□□□□□ -1.45
NUP49YGL172W TRA1P38811 3744 aa6□□□□□ -1.45
NUP49YGL172W FPS1P23900 669 aa5.99□□□□□ -1.45
NUP49YGL172W SUR1P33300 382 aa5.99□□□□□ -1.45
NUP49YGL172W SOF1P33750 489 aaKnown RBP5.99□□□□□ -1.45
NUP49YGL172W SHE1P38200 338 aa5.99□□□□□ -1.45
NUP49YGL172W GOS1P38736 223 aa5.99□□□□□ -1.45
NUP49YGL172W HIS6P40545 261 aa5.99□□□□□ -1.45
NUP49YGL172W POP1P41812 875 aa5.99□□□□□ -1.45
NUP49YGL172W VOA1P53262 265 aa5.99□□□□□ -1.45
NUP49YGL172W YMR265CQ03508 461 aaKnown RBP5.99□□□□□ -1.45
NUP49YGL172W HAS1Q03532 505 aaKnown RBP5.99□□□□□ -1.45
NUP49YGL172W YDR102CQ03864 110 aa5.99□□□□□ -1.45
NUP49YGL172W BNA7Q04066 261 aa5.99□□□□□ -1.45
NUP49YGL172W RNH1Q04740 348 aa5.99□□□□□ -1.45
NUP49YGL172W CTS2Q06350 511 aa5.99□□□□□ -1.45
NUP49YGL172W YDL114WQ07530 308 aa5.99□□□□□ -1.45
NUP49YGL172W MIM1Q08176 113 aa5.99□□□□□ -1.45
NUP49YGL172W YHR214C-EQ8TGK0 99 aa5.99□□□□□ -1.45
NUP49YGL172W SEC12P11655 471 aa5.99□□□□□ -1.45
NUP49YGL172W GAR1P28007 205 aaKnown RBP5.99□□□□□ -1.45
NUP49YGL172W CAM1P29547 415 aaKnown RBP5.99□□□□□ -1.45
NUP49YGL172W VMA6P32366 345 aaKnown RBP5.99□□□□□ -1.45
NUP49YGL172W YER184CP39961 794 aa5.99□□□□□ -1.45
NUP49YGL172W XBP1P40489 647 aa5.99□□□□□ -1.45
NUP49YGL172W SOK2P53438 785 aaPredicted RBP5.99□□□□□ -1.45
NUP49YGL172W MRP51Q02950 344 aa5.99□□□□□ -1.45
NUP49YGL172W COQ11Q05892 277 aa5.99□□□□□ -1.45
NUP49YGL172W YLR346CQ06139 101 aa5.99□□□□□ -1.45
NUP49YGL172W MED2Q12124 431 aa5.99□□□□□ -1.45
NUP49YGL172W RBD2Q12270 262 aa5.99□□□□□ -1.45
NUP49YGL172W COX17Q12287 69 aa5.99□□□□□ -1.45
NUP49YGL172W OPI3P05375 206 aa5.98□□□□□ -1.45
NUP49YGL172W MDH1P17505 334 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
NUP49YGL172W GIT1P25346 518 aa5.98□□□□□ -1.45
NUP49YGL172W REC104P33323 182 aa5.98□□□□□ -1.45
NUP49YGL172W YBR063CP38083 404 aa5.98□□□□□ -1.45
NUP49YGL172W AIM3P38266 947 aaKnown RBP5.98□□□□□ -1.45
NUP49YGL172W CHS7P38843 316 aa5.98□□□□□ -1.45
NUP49YGL172W PTH1P38876 190 aaKnown RBP5.98□□□□□ -1.45
NUP49YGL172W TOK1P40310 691 aa5.98□□□□□ -1.45
NUP49YGL172W SDP1P40479 209 aa5.98□□□□□ -1.45
NUP49YGL172W FMC1P40491 155 aa5.98□□□□□ -1.45
NUP49YGL172W EFM3P47163 339 aa5.98□□□□□ -1.45
NUP49YGL172W APM1Q00776 475 aaPredicted RBP5.98□□□□□ -1.45
NUP49YGL172W PRP3Q03338 469 aaPredicted RBP5.98□□□□□ -1.45
NUP49YGL172W MAK3Q03503 176 aa5.98□□□□□ -1.45
NUP49YGL172W MRPL51Q06090 140 aaPredicted RBP5.98□□□□□ -1.45
NUP49YGL172W NEJ1Q06148 342 aa5.98□□□□□ -1.45
NUP49YGL172W YLR173WQ06247 608 aa5.98□□□□□ -1.45
NUP49YGL172W ATG33Q06485 197 aa5.98□□□□□ -1.45
NUP49YGL172W AIM6Q07716 390 aa5.98□□□□□ -1.45
NUP49YGL172W YDL180WQ12301 547 aa5.98□□□□□ -1.45
NUP49YGL172W ERP4Q12450 207 aa5.98□□□□□ -1.45
NUP49YGL172W RPS13P05756 151 aaKnown RBP5.97□□□□□ -1.45
NUP49YGL172W RPL11AP0C0W9 174 aaKnown RBP5.97□□□□□ -1.45
NUP49YGL172W YGL041W-AP0C5N3 154 aa5.97□□□□□ -1.45
NUP49YGL172W SPO7P18410 259 aa5.97□□□□□ -1.45
NUP49YGL172W STE18P18852 110 aa5.97□□□□□ -1.45
NUP49YGL172W DBP2P24783 546 aaKnown RBP5.97□□□□□ -1.45
NUP49YGL172W STE50P25344 346 aa5.97□□□□□ -1.45
NUP49YGL172W KRR1P25586 316 aaPredicted RBP5.97□□□□□ -1.45
NUP49YGL172W RPS5P26783 225 aaKnown RBP5.97□□□□□ -1.45
NUP49YGL172W FUN19P28003 413 aaPredicted RBP5.97□□□□□ -1.45
NUP49YGL172W DBF20P32328 564 aa5.97□□□□□ -1.45
NUP49YGL172W YME2P32843 850 aa5.97□□□□□ -1.45
NUP49YGL172W RPS0AP32905 252 aaKnown RBP5.97□□□□□ -1.45
NUP49YGL172W RPC34P32910 317 aa5.97□□□□□ -1.45
NUP49YGL172W AFR1P33304 620 aa5.97□□□□□ -1.45
NUP49YGL172W MRPL39P36533 70 aa5.97□□□□□ -1.45
NUP49YGL172W DTR1P38125 572 aa5.97□□□□□ -1.45
NUP49YGL172W YMR262WP38430 313 aa5.97□□□□□ -1.45
NUP49YGL172W BUR6P40096 142 aa5.97□□□□□ -1.45
NUP49YGL172W DPB11P47027 764 aaPredicted RBP5.97□□□□□ -1.45
NUP49YGL172W SAY1P53324 424 aa5.97□□□□□ -1.45
NUP49YGL172W YDR179W-AQ03983 463 aa5.97□□□□□ -1.45
NUP49YGL172W FMP45Q07651 309 aa5.97□□□□□ -1.45
NUP49YGL172W RPL11BQ3E757 174 aaPredicted RBP5.97□□□□□ -1.45
NUP49YGL172W MRP10O75012 95 aa5.96□□□□□ -1.46
NUP49YGL172W MSW1P04803 379 aa5.96□□□□□ -1.46
NUP49YGL172W MAK32P23060 363 aa5.96□□□□□ -1.46
NUP49YGL172W ECT1P33412 323 aa5.96□□□□□ -1.46
NUP49YGL172W SDS22P36047 338 aa5.96□□□□□ -1.46
NUP49YGL172W SRP102P36057 244 aaPredicted RBP5.96□□□□□ -1.46
NUP49YGL172W MTC6P38849 526 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms