RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SLT2	Q00772	484 aa		1.55	□□□□□ -2.16
DOT6	YER088C	MZM1	Q03429	123 aa	Predicted RBP	1.55	□□□□□ -2.16
DOT6	YER088C	YML096W	Q04489	525 aa		1.55	□□□□□ -2.16
DOT6	YER088C	RLP24	Q07915	199 aa	Known RBP	1.55	□□□□□ -2.16
DOT6	YER088C	NBL1	Q3E7Y6	73 aa		1.55	□□□□□ -2.16
DOT6	YER088C	SEC16	P48415	2195 aa	Known RBP	1.54	□□□□□ -2.16
DOT6	YER088C	ARF2	P19146	181 aa	Known RBP	1.54	□□□□□ -2.16
DOT6	YER088C	HMX1	P32339	317 aa		1.54	□□□□□ -2.16
DOT6	YER088C	RNH201	P53942	307 aa		1.54	□□□□□ -2.16
DOT6	YER088C	MRX11	Q03079	207 aa		1.54	□□□□□ -2.16
DOT6	YER088C	YLR012C	Q07927	99 aa		1.54	□□□□□ -2.16
DOT6	YER088C	PER33	Q12144	273 aa		1.54	□□□□□ -2.16
DOT6	YER088C	LDB17	Q12342	491 aa		1.54	□□□□□ -2.16
DOT6	YER088C	STT4	P37297	1900 aa		1.54	□□□□□ -2.16
DOT6	YER088C	POL30	P15873	258 aa	Known RBP	1.54	□□□□□ -2.16
DOT6	YER088C	HXT2	P23585	541 aa		1.54	□□□□□ -2.16
DOT6	YER088C	KRR1	P25586	316 aa	Predicted RBP	1.54	□□□□□ -2.16
DOT6	YER088C	CIN8	P27895	1000 aa		1.54	□□□□□ -2.16
DOT6	YER088C	TIP20	P33891	701 aa		1.54	□□□□□ -2.16
DOT6	YER088C	FRM2	P37261	193 aa		1.54	□□□□□ -2.16
DOT6	YER088C	RBG1	P39729	369 aa		1.54	□□□□□ -2.16
DOT6	YER088C	MOB2	P43563	287 aa		1.54	□□□□□ -2.16
DOT6	YER088C	YFL012W	P43580	148 aa		1.54	□□□□□ -2.16
DOT6	YER088C	CWC22	P53333	577 aa	Known RBP	1.54	□□□□□ -2.16
DOT6	YER088C	PDR16	P53860	351 aa	Known RBP	1.54	□□□□□ -2.16
DOT6	YER088C	APJ1	P53940	528 aa		1.54	□□□□□ -2.16
DOT6	YER088C	SED5	Q01590	340 aa		1.54	□□□□□ -2.16
DOT6	YER088C	YMR310C	Q04867	317 aa	Predicted RBP	1.54	□□□□□ -2.16
DOT6	YER088C	FAR10	Q06001	478 aa		1.54	□□□□□ -2.16
DOT6	YER088C	GAS2	Q06135	555 aa		1.54	□□□□□ -2.16
DOT6	YER088C	YDR018C	Q12185	396 aa		1.54	□□□□□ -2.16
DOT6	YER088C	YAL067W-A	Q8TGK6	75 aa		1.54	□□□□□ -2.16
DOT6	YER088C	ERG9	P29704	444 aa		1.53	□□□□□ -2.16
DOT6	YER088C	YEL043W	P32618	956 aa		1.53	□□□□□ -2.16
DOT6	YER088C	COS9	P36034	407 aa		1.53	□□□□□ -2.16
DOT6	YER088C	MMS21	P38632	267 aa		1.53	□□□□□ -2.16
DOT6	YER088C	RRT13	P40042	185 aa		1.53	□□□□□ -2.16
DOT6	YER088C	STB1	P42845	420 aa		1.53	□□□□□ -2.16
DOT6	YER088C	YJR079W	P47126	109 aa		1.53	□□□□□ -2.16
DOT6	YER088C	ARP5	P53946	755 aa		1.53	□□□□□ -2.16
DOT6	YER088C	YMR010W	Q03687	405 aa		1.53	□□□□□ -2.16
DOT6	YER088C	DDC1	Q08949	612 aa		1.53	□□□□□ -2.16
DOT6	YER088C	STF1	P01098	86 aa		1.52	□□□□□ -2.17
DOT6	YER088C	TAL1	P15019	335 aa	Known RBP	1.52	□□□□□ -2.17
DOT6	YER088C	CDC42	P19073	191 aa		1.52	□□□□□ -2.17
DOT6	YER088C	CWP1	P28319	239 aa		1.52	□□□□□ -2.17
DOT6	YER088C	SPS19	P32573	292 aa	Known RBP	1.52	□□□□□ -2.17
DOT6	YER088C	TAF14	P35189	244 aa		1.52	□□□□□ -2.17
DOT6	YER088C	PRY2	P36110	329 aa		1.52	□□□□□ -2.17
DOT6	YER088C	IML3	P38265	245 aa		1.52	□□□□□ -2.17
DOT6	YER088C	POP2	P39008	433 aa		1.52	□□□□□ -2.17
DOT6	YER088C	SER33	P40510	469 aa		1.52	□□□□□ -2.17
DOT6	YER088C	CIS3	P47001	227 aa		1.52	□□□□□ -2.17
DOT6	YER088C	PRP24	P49960	444 aa	Known RBP	1.52	□□□□□ -2.17
DOT6	YER088C	NAS6	P50086	228 aa		1.52	□□□□□ -2.17
DOT6	YER088C	NBP1	P52919	319 aa	Predicted RBP	1.52	□□□□□ -2.17
DOT6	YER088C	MND1	P53102	219 aa		1.52	□□□□□ -2.17
DOT6	YER088C	PRM1	P53835	661 aa		1.52	□□□□□ -2.17
DOT6	YER088C	API2	Q04413	109 aa		1.52	□□□□□ -2.17
DOT6	YER088C	MCH1	Q07376	486 aa		1.52	□□□□□ -2.17
DOT6	YER088C	ABP140	Q08641	628 aa	Known RBP	1.52	□□□□□ -2.17
DOT6	YER088C	PGC1	Q08959	321 aa		1.52	□□□□□ -2.17
DOT6	YER088C	SLF1	Q12034	447 aa	Known RBP	1.52	□□□□□ -2.17
DOT6	YER088C	TRA1	P38811	3744 aa		1.52	□□□□□ -2.17
DOT6	YER088C	DAL81	P21657	970 aa		1.52	□□□□□ -2.17
DOT6	YER088C	TRX1	P22217	103 aa	Known RBP	1.52	□□□□□ -2.17
DOT6	YER088C	RRT12	P25381	491 aa		1.52	□□□□□ -2.17
DOT6	YER088C	DCC1	P25559	380 aa		1.52	□□□□□ -2.17
DOT6	YER088C	LIN1	P38852	340 aa	Predicted RBP	1.52	□□□□□ -2.17
DOT6	YER088C	TPC1	P53257	314 aa		1.52	□□□□□ -2.17
DOT6	YER088C	HST1	P53685	503 aa		1.52	□□□□□ -2.17
DOT6	YER088C	TIM8	P57744	87 aa		1.52	□□□□□ -2.17
DOT6	YER088C	SPG3	Q04398	127 aa	Predicted RBP	1.52	□□□□□ -2.17
DOT6	YER088C	YDR286C	Q05530	114 aa		1.52	□□□□□ -2.17
DOT6	YER088C	ARR1	Q06596	294 aa		1.52	□□□□□ -2.17
DOT6	YER088C	YLR046C	Q12253	270 aa		1.52	□□□□□ -2.17
DOT6	YER088C	YOR097C	Q12274	175 aa	Predicted RBP	1.52	□□□□□ -2.17
DOT6	YER088C	EPT1	P22140	391 aa		1.51	□□□□□ -2.17
DOT6	YER088C	PPH21	P23594	369 aa		1.51	□□□□□ -2.17
DOT6	YER088C	BMH1	P29311	267 aa	Known RBP	1.51	□□□□□ -2.17
DOT6	YER088C	TPS2	P31688	896 aa	Known RBP	1.51	□□□□□ -2.17
DOT6	YER088C	SMI1	P32566	505 aa		1.51	□□□□□ -2.17
DOT6	YER088C	ECM34	P38728	170 aa		1.51	□□□□□ -2.17
DOT6	YER088C	SPT8	P38915	602 aa		1.51	□□□□□ -2.17
DOT6	YER088C	ALP1	P38971	573 aa		1.51	□□□□□ -2.17
DOT6	YER088C	GGC1	P38988	300 aa		1.51	□□□□□ -2.17
DOT6	YER088C	YER184C	P39961	794 aa		1.51	□□□□□ -2.17
DOT6	YER088C	RRG9	P40156	214 aa		1.51	□□□□□ -2.17
DOT6	YER088C	YFR018C	P43599	363 aa		1.51	□□□□□ -2.17
DOT6	YER088C	SHE4	P51534	789 aa		1.51	□□□□□ -2.17
DOT6	YER088C	HST4	P53688	370 aa		1.51	□□□□□ -2.17
DOT6	YER088C	PIR1	Q03178	341 aa		1.51	□□□□□ -2.17
DOT6	YER088C	TAF9	Q05027	157 aa		1.51	□□□□□ -2.17
DOT6	YER088C	YPL150W	Q12152	901 aa		1.51	□□□□□ -2.17
DOT6	YER088C	AI5_BETA	Q9ZZX0	354 aa		1.51	□□□□□ -2.17
DOT6	YER088C	JIP3	O13555	125 aa		1.5	□□□□□ -2.17
DOT6	YER088C	YKR104W	P0CE69	306 aa		1.5	□□□□□ -2.17
DOT6	YER088C	SCL1	P21243	252 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	COX10	P21592	462 aa		1.5	□□□□□ -2.17
DOT6	YER088C	YCL042W	P25572	119 aa		1.5	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms