RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	LYS5	P50113	272 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	BNA7	Q04066	261 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	AGE1	Q04412	482 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	HRI1	Q05905	244 aa	Known RBP	5.74	□□□□□ -1.49
VMA3	YEL027W	RRP9	Q06506	573 aa	Known RBP	5.74	□□□□□ -1.49
VMA3	YEL027W	MDM36	Q06820	579 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	FRE5	Q08908	694 aa		5.74	□□□□□ -1.49
VMA3	YEL027W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
VMA3	YEL027W	REP1	P03871	373 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	MSW1	P04803	379 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	OPI3	P05375	206 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	KIN28	P06242	306 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	HMG1	P12683	1054 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	SPO7	P18410	259 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	RPL24B	P24000	155 aa	Known RBP	5.73	□□□□□ -1.49
VMA3	YEL027W	GIT1	P25346	518 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	AHC2	P25649	128 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	PPA2	P28239	310 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	ARO7	P32178	256 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	ACH1	P32316	526 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	YBR063C	P38083	404 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	THI2	P38141	450 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	MGE1	P38523	228 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	JLP2	P40206	208 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	TOK1	P40310	691 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	SCW11	P53189	542 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	PAU12	P53343	120 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	PLB2	Q03674	706 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	RCF1	Q03713	159 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	COA4	Q05809	96 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	HMS1	Q12398	434 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	YPR1	Q12458	312 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	HTZ1	Q12692	134 aa	Known RBP	5.73	□□□□□ -1.49
VMA3	YEL027W	YHR214C-E	Q8TGK0	99 aa		5.73	□□□□□ -1.49
VMA3	YEL027W	YEL009C-A	A0A023PZF2	135 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	RPN13	O13563	156 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	RPS13	P05756	151 aa	Known RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	CDC36	P06100	191 aa	Predicted RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	RPA135	P22138	1203 aa	Known RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	CPR2	P23285	205 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	PRE7	P23724	241 aa	Known RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	PUT3	P25502	979 aa	Predicted RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	VPS17	P32913	551 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	MIA40	P36046	403 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	SRP102	P36057	244 aa	Predicted RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	YMR262W	P38430	313 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	CCC1	P47818	322 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	MSY1	P48527	492 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	PPT1	P53043	513 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	SAY1	P53324	424 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	SOK2	P53438	785 aa	Predicted RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	YML108W	Q03759	105 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	RVB1	Q03940	463 aa	Known RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	YDR514C	Q04408	483 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	CRR1	Q05790	422 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	YOR378W	Q08902	515 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	ACF2	Q12168	779 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	BBP1	Q12365	385 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	TY1A-NL1	Q12391	440 aa	Known RBP	5.72	□□□□□ -1.49
VMA3	YEL027W	FRE6	Q12473	712 aa		5.72	□□□□□ -1.49
VMA3	YEL027W	CDC31	P06704	161 aa	Known RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	COX9	P07255	59 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	EXG1	P23776	448 aa	Known RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	DOA4	P32571	926 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	SOF1	P33750	489 aa	Known RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	RSM22	P36056	628 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	GPX2	P38143	162 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	PAU24	P38155	120 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	AIM3	P38266	947 aa	Known RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	YJL218W	P40892	196 aa	Known RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	GDS1	P41913	522 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	PMT6	P42934	759 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	MKC7	P53379	596 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	KAP120	Q02932	1032 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	NNT1	Q05874	261 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	CTS2	Q06350	511 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	GPN3	Q06543	272 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	LUC7	Q07508	261 aa	Predicted RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	MCH4	Q08268	501 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	SYC1	Q08553	188 aa	Predicted RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	SOG2	Q08817	791 aa		5.71	□□□□□ -1.5
VMA3	YEL027W	DCP1	Q12517	231 aa	Predicted RBP	5.71	□□□□□ -1.5
VMA3	YEL027W	QCR7	P00128	127 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	SIR2	P06700	562 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	PDE2	P06776	526 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	BOS1	P25385	244 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	KRR1	P25586	316 aa	Predicted RBP	5.7	□□□□□ -1.5
VMA3	YEL027W	RPC34	P32910	317 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	ANR2	P36090	516 aa	Predicted RBP	5.7	□□□□□ -1.5
VMA3	YEL027W	SLZ1	P40167	298 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	ADO1	P47143	340 aa	Known RBP	5.7	□□□□□ -1.5
VMA3	YEL027W	RMD9	P53140	646 aa	Known RBP	5.7	□□□□□ -1.5
VMA3	YEL027W	IMO32	P53219	342 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	CPR8	P53728	308 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	YNR040W	P53736	256 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	MRPL19	P53875	158 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	AIM36	Q03798	255 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	YDR102C	Q03864	110 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	MRX8	Q05473	314 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	RBS1	Q05672	457 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms