RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C YNL320WP42840 284 aa5.03□□□□□ -1.6
VPS72YDR485C MSO1P53604 210 aaKnown RBP5.03□□□□□ -1.6
VPS72YDR485C COQ10Q08058 207 aa5.03□□□□□ -1.6
VPS72YDR485C RSA1Q08932 381 aa5.03□□□□□ -1.6
VPS72YDR485C MMT2Q08970 484 aa5.03□□□□□ -1.6
VPS72YDR485C CSR2Q12734 1121 aa5.03□□□□□ -1.6
VPS72YDR485C SIR4P11978 1358 aa5.03□□□□□ -1.6
VPS72YDR485C RPL28P02406 149 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C RPS14AP06367 137 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C RNA14P25298 677 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C GOS1P38736 223 aa5.02□□□□□ -1.61
VPS72YDR485C NDT80P38830 627 aa5.02□□□□□ -1.61
VPS72YDR485C MTC6P38849 526 aa5.02□□□□□ -1.61
VPS72YDR485C RPS14BP39516 138 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C PRE6P40303 254 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C ICE2P40499 491 aa5.02□□□□□ -1.61
VPS72YDR485C AIM23P47015 356 aa5.02□□□□□ -1.61
VPS72YDR485C YLR460CP54007 376 aa5.02□□□□□ -1.61
VPS72YDR485C SCS7Q03529 384 aa5.02□□□□□ -1.61
VPS72YDR485C TDA1Q03533 586 aa5.02□□□□□ -1.61
VPS72YDR485C PRM6Q04705 352 aa5.02□□□□□ -1.61
VPS72YDR485C YEH2Q07950 538 aa5.02□□□□□ -1.61
VPS72YDR485C ESA1Q08649 445 aa5.02□□□□□ -1.61
VPS72YDR485C WTM1Q12363 437 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C RPL23AP0CX41 137 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C RPL23BP0CX42 137 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C SRP14P38985 146 aa5.02□□□□□ -1.61
VPS72YDR485C MRPL49P40858 161 aaPredicted RBP5.02□□□□□ -1.61
VPS72YDR485C OST1P41543 476 aaKnown RBP5.02□□□□□ -1.61
VPS72YDR485C NUP57P48837 541 aa5.02□□□□□ -1.61
VPS72YDR485C TIM44Q01852 431 aa5.02□□□□□ -1.61
VPS72YDR485C VPS60Q03390 229 aa5.02□□□□□ -1.61
VPS72YDR485C YPL199CQ08954 240 aa5.02□□□□□ -1.61
VPS72YDR485C ICT1Q12385 394 aa5.02□□□□□ -1.61
VPS72YDR485C PUT1P09368 476 aa5.01□□□□□ -1.61
VPS72YDR485C SNA3P14359 133 aa5.01□□□□□ -1.61
VPS72YDR485C SGE1P33335 543 aa5.01□□□□□ -1.61
VPS72YDR485C YCR087C-AP37263 153 aa5.01□□□□□ -1.61
VPS72YDR485C MIX23P38162 196 aa5.01□□□□□ -1.61
VPS72YDR485C FZO1P38297 855 aa5.01□□□□□ -1.61
VPS72YDR485C YBP1P38315 674 aa5.01□□□□□ -1.61
VPS72YDR485C RCK1P38622 512 aa5.01□□□□□ -1.61
VPS72YDR485C HEM14P40012 539 aa5.01□□□□□ -1.61
VPS72YDR485C OST3P48439 350 aa5.01□□□□□ -1.61
VPS72YDR485C IDP3P53982 420 aaKnown RBP5.01□□□□□ -1.61
VPS72YDR485C DPP1Q05521 289 aa5.01□□□□□ -1.61
VPS72YDR485C MRX9Q07349 420 aaKnown RBP5.01□□□□□ -1.61
VPS72YDR485C RRP42Q12277 265 aaPredicted RBP5.01□□□□□ -1.61
VPS72YDR485C FOL3Q12676 427 aaPredicted RBP5.01□□□□□ -1.61
VPS72YDR485C YPL119C-AQ3E751 87 aa5.01□□□□□ -1.61
VPS72YDR485C STH1P32597 1359 aa5.01□□□□□ -1.61
VPS72YDR485C RPL16AP26784 199 aaKnown RBP5.01□□□□□ -1.61
VPS72YDR485C VAB2P40003 282 aa5.01□□□□□ -1.61
VPS72YDR485C AZF1P41696 914 aa5.01□□□□□ -1.61
VPS72YDR485C LCB3P47013 409 aa5.01□□□□□ -1.61
VPS72YDR485C IKS1P47042 667 aa5.01□□□□□ -1.61
VPS72YDR485C TOS8P53147 276 aa5.01□□□□□ -1.61
VPS72YDR485C TPC1P53257 314 aa5.01□□□□□ -1.61
VPS72YDR485C SYF2P53277 215 aaPredicted RBP5.01□□□□□ -1.61
VPS72YDR485C YLR152CP54072 576 aa5.01□□□□□ -1.61
VPS72YDR485C RPL15BP54780 204 aaPredicted RBP5.01□□□□□ -1.61
VPS72YDR485C YNG1Q08465 219 aa5.01□□□□□ -1.61
VPS72YDR485C SPT3P06844 337 aa5□□□□□ -1.61
VPS72YDR485C QCR2P07257 368 aa5□□□□□ -1.61
VPS72YDR485C BCY1P07278 416 aaKnown RBP5□□□□□ -1.61
VPS72YDR485C ERD1P16151 362 aa5□□□□□ -1.61
VPS72YDR485C GIT1P25346 518 aa5□□□□□ -1.61
VPS72YDR485C SRY1P36007 326 aa5□□□□□ -1.61
VPS72YDR485C YPL229WQ99395 206 aa5□□□□□ -1.61
VPS72YDR485C YER190C-BP0CX94 160 aa5□□□□□ -1.61
VPS72YDR485C YEL077W-AP0CX95 160 aa5□□□□□ -1.61
VPS72YDR485C YGR296C-BP0CX96 160 aa5□□□□□ -1.61
VPS72YDR485C YPL283W-BP0CX97 160 aa5□□□□□ -1.61
VPS72YDR485C YPR204C-AP0CX98 160 aa5□□□□□ -1.61
VPS72YDR485C CPT1P17898 393 aa5□□□□□ -1.61
VPS72YDR485C DEP1P31385 405 aa5□□□□□ -1.61
VPS72YDR485C ATS1P31386 333 aa5□□□□□ -1.61
VPS72YDR485C MOH1P38191 138 aa5□□□□□ -1.61
VPS72YDR485C FLO5P38894 1075 aa5□□□□□ -1.61
VPS72YDR485C IRC18P47056 224 aa5□□□□□ -1.61
VPS72YDR485C PRP24P49960 444 aaKnown RBP5□□□□□ -1.61
VPS72YDR485C YML096WQ04489 525 aa5□□□□□ -1.61
VPS72YDR485C SPC2Q04969 178 aa5□□□□□ -1.61
VPS72YDR485C USB1Q12208 290 aaKnown RBP5□□□□□ -1.61
VPS72YDR485C YLR126CQ12288 251 aa5□□□□□ -1.61
VPS72YDR485C CYC3P06182 269 aa4.99□□□□□ -1.61
VPS72YDR485C MRS3P10566 314 aa4.99□□□□□ -1.61
VPS72YDR485C INO2P26798 304 aa4.99□□□□□ -1.61
VPS72YDR485C YOX1P34161 385 aa4.99□□□□□ -1.61
VPS72YDR485C GRE3P38715 327 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
VPS72YDR485C SHC1P39000 512 aa4.99□□□□□ -1.61
VPS72YDR485C CFD1P40558 293 aa4.99□□□□□ -1.61
VPS72YDR485C LSM1P47017 172 aaKnown RBP4.99□□□□□ -1.61
VPS72YDR485C UTP15Q04305 513 aaKnown RBP4.99□□□□□ -1.61
VPS72YDR485C YPR098CQ06089 161 aa4.99□□□□□ -1.61
VPS72YDR485C YPL150WQ12152 901 aa4.99□□□□□ -1.61
VPS72YDR485C MCT1Q12283 360 aa4.99□□□□□ -1.61
VPS72YDR485C HEM4P06174 275 aa4.99□□□□□ -1.61
VPS72YDR485C FUN26P31381 517 aa4.99□□□□□ -1.61
VPS72YDR485C NSA1P53136 463 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms