RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W ATP7P30902 174 aa1.86□□□□□ -2.11
SIR4YDR227W CSE2P33308 149 aa1.86□□□□□ -2.11
SIR4YDR227W RIB5P38145 238 aa1.86□□□□□ -2.11
SIR4YDR227W HEK2P38199 381 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11 RIP-Chip
SIR4YDR227W CTK3P46963 296 aaPredicted RBP1.86□□□□□ -2.11
SIR4YDR227W COX16P47081 118 aa1.86□□□□□ -2.11
SIR4YDR227W YJR015WP47090 510 aa1.86□□□□□ -2.11
SIR4YDR227W YJR054WP47114 497 aa1.86□□□□□ -2.11
SIR4YDR227W COS12P53053 380 aa1.86□□□□□ -2.11
SIR4YDR227W MRPL22P53881 309 aa1.86□□□□□ -2.11
SIR4YDR227W MTQ1P53944 314 aa1.86□□□□□ -2.11
SIR4YDR227W SED5Q01590 340 aa1.86□□□□□ -2.11
SIR4YDR227W GAS2Q06135 555 aa1.86□□□□□ -2.11
SIR4YDR227W RAD34Q06665 692 aa1.86□□□□□ -2.11
SIR4YDR227W AHA1Q12449 350 aaKnown RBP1.86□□□□□ -2.11
SIR4YDR227W YER145C-AA0A023PYF4 145 aa1.86□□□□□ -2.11
SIR4YDR227W CYC1P00044 109 aaPredicted RBP1.86□□□□□ -2.11
SIR4YDR227W RPL25P04456 142 aaKnown RBP1.86□□□□□ -2.11
SIR4YDR227W MF(ALPHA)2P32435 120 aa1.86□□□□□ -2.11
SIR4YDR227W YHR112CP38716 378 aa1.86□□□□□ -2.11
SIR4YDR227W TIF34P40217 347 aaKnown RBP1.86□□□□□ -2.11
SIR4YDR227W URB2P47108 1174 aa1.86□□□□□ -2.11
SIR4YDR227W COS5P47187 383 aa1.86□□□□□ -2.11
SIR4YDR227W YGL193CP53097 103 aa1.86□□□□□ -2.11
SIR4YDR227W MTM1P53320 366 aa1.86□□□□□ -2.11
SIR4YDR227W BUD32P53323 261 aa1.86□□□□□ -2.11
SIR4YDR227W STE23Q06010 1027 aa1.86□□□□□ -2.11
SIR4YDR227W YHR214C-EQ8TGK0 99 aa1.86□□□□□ -2.11
SIR4YDR227W RPC31P17890 251 aa1.85□□□□□ -2.11
SIR4YDR227W BUD23P25627 275 aaPredicted RBP1.85□□□□□ -2.11
SIR4YDR227W SKN1P33336 771 aa1.85□□□□□ -2.11
SIR4YDR227W RPS1AP33442 255 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W NNK1P36003 928 aa1.85□□□□□ -2.11
SIR4YDR227W YPK3P38070 525 aa1.85□□□□□ -2.11
SIR4YDR227W INM1P38710 295 aa1.85□□□□□ -2.11
SIR4YDR227W YHI9P38765 294 aa1.85□□□□□ -2.11
SIR4YDR227W GCN20P43535 752 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W STE24P47154 453 aa1.85□□□□□ -2.11
SIR4YDR227W MNN10P50108 393 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W MMS2P53152 137 aa1.85□□□□□ -2.11
SIR4YDR227W SLI1P53304 468 aa1.85□□□□□ -2.11
SIR4YDR227W EFM6P53970 246 aa1.85□□□□□ -2.11
SIR4YDR227W TPO3Q06451 622 aa1.85□□□□□ -2.11
SIR4YDR227W TDA6Q06466 467 aa1.85□□□□□ -2.11
SIR4YDR227W INP53Q12271 1107 aa1.85□□□□□ -2.11
SIR4YDR227W REP1P03871 373 aa1.85□□□□□ -2.11
SIR4YDR227W ARG4P04076 463 aaPredicted RBP1.85□□□□□ -2.11
SIR4YDR227W SUA7P29055 345 aaPredicted RBP1.85□□□□□ -2.11
SIR4YDR227W DEP1P31385 405 aa1.85□□□□□ -2.11
SIR4YDR227W PDB1P32473 366 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W VBA2P38358 474 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W SUR2P38992 349 aa1.85□□□□□ -2.11
SIR4YDR227W CIN4P39110 191 aa1.85□□□□□ -2.11
SIR4YDR227W YER121WP40076 114 aa1.85□□□□□ -2.11
SIR4YDR227W YGL260WP53056 76 aa1.85□□□□□ -2.11
SIR4YDR227W COG5P53951 403 aa1.85□□□□□ -2.11
SIR4YDR227W APC4Q04601 652 aa1.85□□□□□ -2.11
SIR4YDR227W YDL086WQ07505 273 aa1.85□□□□□ -2.11
SIR4YDR227W RCL1Q08096 367 aaPredicted RBP1.85□□□□□ -2.11
SIR4YDR227W YLR422WQ06409 1932 aa1.85□□□□□ -2.11
SIR4YDR227W YER190C-BP0CX94 160 aa1.85□□□□□ -2.11
SIR4YDR227W YEL077W-AP0CX95 160 aa1.85□□□□□ -2.11
SIR4YDR227W YGR296C-BP0CX96 160 aa1.85□□□□□ -2.11
SIR4YDR227W YPL283W-BP0CX97 160 aa1.85□□□□□ -2.11
SIR4YDR227W YPR204C-AP0CX98 160 aa1.85□□□□□ -2.11
SIR4YDR227W YFL068WP0CX99 160 aa1.85□□□□□ -2.11
SIR4YDR227W YLL066W-AP0CY00 160 aa1.85□□□□□ -2.11
SIR4YDR227W YLL067W-AP0CY01 160 aa1.85□□□□□ -2.11
SIR4YDR227W RAD57P25301 460 aa1.85□□□□□ -2.11
SIR4YDR227W YCR006CP25350 157 aa1.85□□□□□ -2.11
SIR4YDR227W CPR3P25719 182 aa1.85□□□□□ -2.11
SIR4YDR227W LAC1P28496 418 aa1.85□□□□□ -2.11
SIR4YDR227W RAD5P32849 1169 aaPredicted RBP1.85□□□□□ -2.11
SIR4YDR227W YBR139WP38109 508 aa1.85□□□□□ -2.11
SIR4YDR227W EGT2P42835 1041 aa1.85□□□□□ -2.11
SIR4YDR227W YPR003CP53394 754 aa1.85□□□□□ -2.11
SIR4YDR227W SHR3Q02774 210 aa1.85□□□□□ -2.11
SIR4YDR227W SNU56Q03782 492 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W IPK1Q06667 281 aa1.85□□□□□ -2.11
SIR4YDR227W BER1Q06688 274 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W YOL159CQ08300 171 aa1.85□□□□□ -2.11
SIR4YDR227W LPX1Q12405 387 aaKnown RBP1.85□□□□□ -2.11
SIR4YDR227W ADH2P00331 348 aaKnown RBP1.84□□□□□ -2.11
SIR4YDR227W RPL19AP0CX82 189 aaKnown RBP1.84□□□□□ -2.11
SIR4YDR227W RPL19BP0CX83 189 aaPredicted RBP1.84□□□□□ -2.11
SIR4YDR227W PTC6P25646 442 aa1.84□□□□□ -2.11
SIR4YDR227W SEN34P39707 275 aa1.84□□□□□ -2.11
SIR4YDR227W YAT2P40017 923 aa1.84□□□□□ -2.11
SIR4YDR227W GAT1P43574 510 aa1.84□□□□□ -2.11
SIR4YDR227W LSM1P47017 172 aaKnown RBP1.84□□□□□ -2.11
SIR4YDR227W TAZ1Q06510 381 aa1.84□□□□□ -2.11
SIR4YDR227W NOC4Q06512 552 aaPredicted RBP1.84□□□□□ -2.11
SIR4YDR227W COS7Q07788 383 aa1.84□□□□□ -2.11
SIR4YDR227W DAS2Q12084 232 aa1.84□□□□□ -2.11
SIR4YDR227W YPL119C-AQ3E751 87 aa1.84□□□□□ -2.11
SIR4YDR227W CCW14O13547 238 aa1.84□□□□□ -2.11
SIR4YDR227W SIR3P06701 978 aa1.84□□□□□ -2.11
SIR4YDR227W SAT4P25333 603 aaKnown RBP1.84□□□□□ -2.11
SIR4YDR227W PMT2P31382 759 aa1.84□□□□□ -2.11
SIR4YDR227W MSK1P32048 576 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms