RNA–Protein interactions for RNA: YDR205W

MSC2, Transcript of Endoplasmic reticulum zinc transporter, yeast

Gene MSC2, Length 2,175 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC2	YDR205W	YPL108W	Q02872	168 aa	Predicted RBP	4.15	□□□□□ -1.75
MSC2	YDR205W	CTL1	Q03220	320 aa	Known RBP	4.15	□□□□□ -1.75
MSC2	YDR205W	SEC13	Q04491	297 aa	Known RBP	4.15	□□□□□ -1.75
MSC2	YDR205W	ELP6	Q04868	273 aa		4.15	□□□□□ -1.75
MSC2	YDR205W	NNT1	Q05874	261 aa		4.15	□□□□□ -1.75
MSC2	YDR205W	CTS2	Q06350	511 aa		4.15	□□□□□ -1.75
MSC2	YDR205W	YPR091C	Q06833	770 aa		4.15	□□□□□ -1.75
MSC2	YDR205W	YLR040C	Q07988	224 aa		4.15	□□□□□ -1.75
MSC2	YDR205W	DFG16	Q99234	619 aa		4.15	□□□□□ -1.75
MSC2	YDR205W	FAS1	P07149	2051 aa	Known RBP	4.15	□□□□□ -1.75
MSC2	YDR205W	NFT1	P0CE68	1218 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	MCK1	P21965	375 aa	Known RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	IDS2	P46958	469 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	IMD3	P50095	523 aa	Known RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	YIP5	P53108	310 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	SUN4	P53616	420 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	BUD17	P53727	317 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	CPR8	P53728	308 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	COS1	P53822	381 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	YPL068C	Q02749	293 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	MAK3	Q03503	176 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	FIN1	Q03898	291 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	CAB5	Q03941	241 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	CRT10	Q08226	957 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	BSC6	Q08280	497 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	AEP3	Q12089	606 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	ACF2	Q12168	779 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	TPO4	Q12256	659 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	YOS9	Q99220	542 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	PDA1	P16387	420 aa	Known RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	RPL24B	P24000	155 aa	Known RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	PBN1	P25580	416 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	NDC1	P32500	655 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	SRL3	P36167	246 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	YHR035W	P38769	630 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	NVJ1	P38881	321 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	VHS2	P40463	436 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	FMC1	P40491	155 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	CDC40	P40968	455 aa	Predicted RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	BNA6	P43619	295 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	LOH1	P47055	219 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	IBA57	P47158	497 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	YGL101W	P53144	215 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	TNA1	P53322	534 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	MKC7	P53379	596 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	SOK2	P53438	785 aa	Predicted RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	ERG13	P54839	491 aa	Known RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	YML053C	Q04978	212 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	GPN3	Q06543	272 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	YLR030W	Q07967	263 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	SKI7	Q08491	747 aa	Predicted RBP	4.14	□□□□□ -1.75
MSC2	YDR205W	YOR365C	Q08844	703 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	UIP4	Q08926	304 aa		4.14	□□□□□ -1.75
MSC2	YDR205W	YOL162W	P0CF19	215 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	CDC23	P16522	626 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	YCP4	P25349	247 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	CHA1	P25379	360 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	CWP1	P28319	239 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	YJL218W	P40892	196 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	STB1	P42845	420 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	YAE1	P47118	141 aa	Predicted RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	LYS5	P50113	272 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	COS10	P52924	374 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	LSG1	P53145	640 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	BUD9	P53226	547 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	YDR541C	Q03049	344 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	EKI1	Q03764	534 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	PCL9	Q12477	304 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	DET1	Q99288	334 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	YBR085C-A	O43137	85 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	TDH2	P00358	332 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
MSC2	YDR205W	SEC12	P11655	471 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	HSP30	P25619	332 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	BUD23	P25627	275 aa	Predicted RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	ARO7	P32178	256 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
MSC2	YDR205W	TOD6	P34219	525 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	SNU114	P36048	1008 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	VPS51	P36116	164 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	GDS1	P41913	522 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	TOS2	P50078	622 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	YGL235W	P53071	178 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	ARO8	P53090	500 aa	Known RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	RSM28	Q03430	361 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	OST6	Q03723	332 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	PEX10	Q05568	337 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	YOR289W	Q12012	251 aa	Predicted RBP	4.13	□□□□□ -1.75
MSC2	YDR205W	SPC3	Q12133	184 aa		4.13	□□□□□ -1.75
MSC2	YDR205W	ADE5,7	P07244	802 aa	Known RBP	4.12	□□□□□ -1.75
MSC2	YDR205W	MET2	P08465	486 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	MATALPHA1	P0CY06	175 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	HMLALPHA1	P0CY07	175 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	PHO80	P20052	293 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	ADH7	P25377	361 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	YCR100C	P25606	316 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	MBA1	P38300	278 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	RPS20	P38701	121 aa	Known RBP	4.12	□□□□□ -1.75
MSC2	YDR205W	CHL4	P38907	458 aa		4.12	□□□□□ -1.75
MSC2	YDR205W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms