RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C YJL043WP47053 257 aa3.78□□□□□ -1.8
CDC9YDL164C YJR141WP47172 347 aaPredicted RBP3.78□□□□□ -1.8
CDC9YDL164C OST3P48439 350 aa3.78□□□□□ -1.8
CDC9YDL164C MIC26P50087 233 aa3.78□□□□□ -1.8
CDC9YDL164C AVT4P50944 713 aa3.78□□□□□ -1.8
CDC9YDL164C SUR7P54003 302 aa3.78□□□□□ -1.8
CDC9YDL164C BET5Q03630 159 aa3.78□□□□□ -1.8
CDC9YDL164C PET494P07390 489 aaPredicted RBP3.77□□□□□ -1.81
CDC9YDL164C RSM25P40496 264 aa3.77□□□□□ -1.81
CDC9YDL164C IKS1P47042 667 aa3.77□□□□□ -1.81
CDC9YDL164C YJR030CP47101 745 aa3.77□□□□□ -1.81
CDC9YDL164C SCS7Q03529 384 aa3.77□□□□□ -1.81
CDC9YDL164C UTP15Q04305 513 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C YNG1Q08465 219 aa3.77□□□□□ -1.81
CDC9YDL164C UTP23Q12339 254 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C GEA1P47102 1408 aaPredicted RBP3.77□□□□□ -1.81
CDC9YDL164C KOG1P38873 1557 aa3.77□□□□□ -1.81
CDC9YDL164C NUP159P40477 1460 aa3.77□□□□□ -1.81
CDC9YDL164C GCN2P15442 1659 aa3.77□□□□□ -1.81
CDC9YDL164C RPS14AP06367 137 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C YOL163WP0CF20 169 aa3.77□□□□□ -1.81
CDC9YDL164C GLN3P18494 730 aa3.77□□□□□ -1.81
CDC9YDL164C YCR087C-AP37263 153 aa3.77□□□□□ -1.81
CDC9YDL164C RPS14BP39516 138 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C LSM1P47017 172 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C TPS1Q00764 495 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C BCH1Q05029 724 aa3.77□□□□□ -1.81
CDC9YDL164C YPR147CQ06522 304 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C HNT3Q08702 217 aa3.77□□□□□ -1.81
CDC9YDL164C RDL2Q08742 149 aaKnown RBP3.77□□□□□ -1.81
CDC9YDL164C TIM18Q08749 192 aa3.77□□□□□ -1.81
CDC9YDL164C IZH4Q99393 312 aa3.77□□□□□ -1.81
CDC9YDL164C YOR1P53049 1477 aa3.76□□□□□ -1.81
CDC9YDL164C SIR4P11978 1358 aa3.76□□□□□ -1.81
CDC9YDL164C YHR139C-AO13536 103 aa3.76□□□□□ -1.81
CDC9YDL164C ILV1P00927 576 aaKnown RBP3.76□□□□□ -1.81
CDC9YDL164C RPL20AP0CX23 172 aaKnown RBP3.76□□□□□ -1.81
CDC9YDL164C RPL20BP0CX24 172 aaPredicted RBP3.76□□□□□ -1.81
CDC9YDL164C SNA3P14359 133 aa3.76□□□□□ -1.81
CDC9YDL164C SFH5P47008 294 aa3.76□□□□□ -1.81
CDC9YDL164C YPS5P53057 165 aa3.76□□□□□ -1.81
CDC9YDL164C NQM1P53228 333 aaPredicted RBP3.76□□□□□ -1.81
CDC9YDL164C TPC1P53257 314 aa3.76□□□□□ -1.81
CDC9YDL164C ERG13P54839 491 aaKnown RBP3.76□□□□□ -1.81
CDC9YDL164C TRM82Q03774 444 aa3.76□□□□□ -1.81
CDC9YDL164C MHR1Q06630 226 aa3.76□□□□□ -1.81
CDC9YDL164C YEH2Q07950 538 aa3.76□□□□□ -1.81
CDC9YDL164C MIM1Q08176 113 aa3.76□□□□□ -1.81
CDC9YDL164C JLP1Q12358 412 aa3.76□□□□□ -1.81
CDC9YDL164C RPS3P05750 240 aaKnown RBP3.75□□□□□ -1.81
CDC9YDL164C GCY1P14065 312 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
CDC9YDL164C YAP1P19880 650 aaKnown RBP3.75□□□□□ -1.81
CDC9YDL164C NAM9P27929 486 aa3.75□□□□□ -1.81
CDC9YDL164C ATS1P31386 333 aa3.75□□□□□ -1.81
CDC9YDL164C GLC7P32598 312 aaKnown RBP3.75□□□□□ -1.81
CDC9YDL164C SDS24P38314 527 aa3.75□□□□□ -1.81
CDC9YDL164C NRK1P53915 240 aa3.75□□□□□ -1.81
CDC9YDL164C PET191Q02772 108 aa3.75□□□□□ -1.81
CDC9YDL164C ARO80Q04052 950 aa3.75□□□□□ -1.81
CDC9YDL164C PRM6Q04705 352 aa3.75□□□□□ -1.81
CDC9YDL164C GLO2Q05584 274 aa3.75□□□□□ -1.81
CDC9YDL164C DDC1Q08949 612 aa3.75□□□□□ -1.81
CDC9YDL164C MET2P08465 486 aa3.75□□□□□ -1.81
CDC9YDL164C SLY1P22213 666 aa3.75□□□□□ -1.81
CDC9YDL164C RPL16BP26785 198 aaKnown RBP3.75□□□□□ -1.81
CDC9YDL164C KAR9P32526 644 aa3.75□□□□□ -1.81
CDC9YDL164C NUF2P33895 451 aa3.75□□□□□ -1.81
CDC9YDL164C APD1P38281 316 aa3.75□□□□□ -1.81
CDC9YDL164C SRP14P38985 146 aa3.75□□□□□ -1.81
CDC9YDL164C RTS2P40962 232 aa3.75□□□□□ -1.81
CDC9YDL164C YJR012CP47087 207 aa3.75□□□□□ -1.81
CDC9YDL164C USE1P53146 245 aa3.75□□□□□ -1.81
CDC9YDL164C YLR152CP54072 576 aa3.75□□□□□ -1.81
CDC9YDL164C CTL1Q03220 320 aaKnown RBP3.75□□□□□ -1.81
CDC9YDL164C CTR3Q06686 241 aa3.75□□□□□ -1.81
CDC9YDL164C YPL150WQ12152 901 aa3.75□□□□□ -1.81
CDC9YDL164C MCT1Q12283 360 aa3.75□□□□□ -1.81
CDC9YDL164C PET20Q99373 253 aa3.75□□□□□ -1.81
CDC9YDL164C RNA14P25298 677 aaKnown RBP3.74□□□□□ -1.81
CDC9YDL164C HMT1P38074 348 aa3.74□□□□□ -1.81
CDC9YDL164C RCK1P38622 512 aa3.74□□□□□ -1.81
CDC9YDL164C VAB2P40003 282 aa3.74□□□□□ -1.81
CDC9YDL164C AIM23P47015 356 aa3.74□□□□□ -1.81
CDC9YDL164C YGL235WP53071 178 aa3.74□□□□□ -1.81
CDC9YDL164C MRM2P53123 320 aa3.74□□□□□ -1.81
CDC9YDL164C YDR209CQ03480 137 aa3.74□□□□□ -1.81
CDC9YDL164C YMR315WQ04869 349 aaKnown RBP3.74□□□□□ -1.81
CDC9YDL164C PEX30Q06169 523 aa3.74□□□□□ -1.81
CDC9YDL164C BSP1Q06604 576 aa3.74□□□□□ -1.81
CDC9YDL164C RKR1Q04781 1562 aa3.74□□□□□ -1.81
CDC9YDL164C SPT3P06844 337 aa3.74□□□□□ -1.81
CDC9YDL164C PHO2P07269 559 aa3.74□□□□□ -1.81
CDC9YDL164C CUP2P15315 225 aa3.74□□□□□ -1.81
CDC9YDL164C ATG15P25641 520 aa3.74□□□□□ -1.81
CDC9YDL164C PDC2P32896 925 aa3.74□□□□□ -1.81
CDC9YDL164C SIP2P34164 415 aaKnown RBP3.74□□□□□ -1.81
CDC9YDL164C CLG1P35190 452 aa3.74□□□□□ -1.81
CDC9YDL164C AVT5P38176 459 aa3.74□□□□□ -1.81
CDC9YDL164C GRE3P38715 327 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
CDC9YDL164C CPR7P47103 393 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms