RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C ASP3-2P0CX77 362 aa2.78□□□□□ -1.96
RRP42YDL111C ASP3-3P0CX78 362 aa2.78□□□□□ -1.96
RRP42YDL111C ASP3-4P0CX79 362 aa2.78□□□□□ -1.96
RRP42YDL111C ASP3-1P0CZ17 362 aa2.78□□□□□ -1.96
RRP42YDL111C DAL81P21657 970 aa2.78□□□□□ -1.96
RRP42YDL111C VPS3P23643 1011 aa2.78□□□□□ -1.96
RRP42YDL111C RNA15P25299 296 aaPredicted RBP2.78□□□□□ -1.96
RRP42YDL111C PEX3P28795 441 aa2.78□□□□□ -1.96
RRP42YDL111C TPS2P31688 896 aaKnown RBP2.78□□□□□ -1.96
RRP42YDL111C VPH2P32341 215 aa2.78□□□□□ -1.96
RRP42YDL111C TIP20P33891 701 aa2.78□□□□□ -1.96
RRP42YDL111C AIM29P36154 155 aa2.78□□□□□ -1.96
RRP42YDL111C GGC1P38988 300 aa2.78□□□□□ -1.96
RRP42YDL111C HIT1P46973 164 aa2.78□□□□□ -1.96
RRP42YDL111C PGA2P53903 129 aa2.78□□□□□ -1.96
RRP42YDL111C YNL040WP53960 456 aaPredicted RBP2.78□□□□□ -1.96
RRP42YDL111C RNY1Q02933 434 aaKnown RBP2.78□□□□□ -1.96
RRP42YDL111C MRX11Q03079 207 aa2.78□□□□□ -1.96
RRP42YDL111C SEC10Q06245 871 aa2.78□□□□□ -1.96
RRP42YDL111C YOR292CQ08743 309 aa2.78□□□□□ -1.96
RRP42YDL111C YOR376WQ08900 122 aa2.78□□□□□ -1.96
RRP42YDL111C SRO7Q12038 1033 aa2.78□□□□□ -1.96
RRP42YDL111C YAL064W-BO13512 126 aa2.77□□□□□ -1.97
RRP42YDL111C RPP0P05317 312 aaKnown RBP2.77□□□□□ -1.97
RRP42YDL111C PET494P07390 489 aaPredicted RBP2.77□□□□□ -1.97
RRP42YDL111C REV1P12689 985 aa2.77□□□□□ -1.97
RRP42YDL111C DOA4P32571 926 aa2.77□□□□□ -1.97
RRP42YDL111C SPS19P32573 292 aaKnown RBP2.77□□□□□ -1.97
RRP42YDL111C IES6P32617 166 aa2.77□□□□□ -1.97
RRP42YDL111C CDC13P32797 924 aaKnown RBP2.77□□□□□ -1.97
RRP42YDL111C GPX1P36014 167 aa2.77□□□□□ -1.97
RRP42YDL111C RFT1P38206 574 aaPredicted RBP2.77□□□□□ -1.97
RRP42YDL111C DSN1P40568 576 aa2.77□□□□□ -1.97
RRP42YDL111C YJR012CP47087 207 aa2.77□□□□□ -1.97
RRP42YDL111C COG7P53195 279 aa2.77□□□□□ -1.97
RRP42YDL111C PEX31P53203 462 aa2.77□□□□□ -1.97
RRP42YDL111C CDC14Q00684 551 aa2.77□□□□□ -1.97
RRP42YDL111C YDR209CQ03480 137 aa2.77□□□□□ -1.97
RRP42YDL111C MYO5Q04439 1219 aaKnown RBP2.77□□□□□ -1.97
RRP42YDL111C SEC13Q04491 297 aaKnown RBP2.77□□□□□ -1.97
RRP42YDL111C PAL1Q05518 499 aaKnown RBP2.77□□□□□ -1.97
RRP42YDL111C FOL3Q12676 427 aaPredicted RBP2.77□□□□□ -1.97
RRP42YDL111C ADF1Q2V2Q1 113 aa2.77□□□□□ -1.97
RRP42YDL111C YOS9Q99220 542 aa2.77□□□□□ -1.97
RRP42YDL111C COX4P04037 155 aa2.76□□□□□ -1.97
RRP42YDL111C RPS5P26783 225 aaKnown RBP2.76□□□□□ -1.97
RRP42YDL111C YEL045CP32616 141 aa2.76□□□□□ -1.97
RRP42YDL111C ALK2P32789 676 aaPredicted RBP2.76□□□□□ -1.97
RRP42YDL111C MBA1P38300 278 aa2.76□□□□□ -1.97
RRP42YDL111C MIC19P43594 170 aa2.76□□□□□ -1.97
RRP42YDL111C LIF1P53150 421 aa2.76□□□□□ -1.97
RRP42YDL111C YGL039WP53183 348 aaKnown RBP2.76□□□□□ -1.97
RRP42YDL111C CGR1P53188 120 aa2.76□□□□□ -1.97
RRP42YDL111C MAL13P53338 473 aa2.76□□□□□ -1.97
RRP42YDL111C RPL21AQ02753 160 aaKnown RBP2.76□□□□□ -1.97
RRP42YDL111C VPS60Q03390 229 aa2.76□□□□□ -1.97
RRP42YDL111C VHS1Q03785 461 aa2.76□□□□□ -1.97
RRP42YDL111C API2Q04413 109 aa2.76□□□□□ -1.97
RRP42YDL111C YDR018CQ12185 396 aa2.76□□□□□ -1.97
RRP42YDL111C TRM10Q12400 293 aa2.76□□□□□ -1.97
RRP42YDL111C STH1P32597 1359 aa2.75□□□□□ -1.97
RRP42YDL111C RPL24BP24000 155 aaKnown RBP2.75□□□□□ -1.97
RRP42YDL111C LDB7P38210 180 aa2.75□□□□□ -1.97
RRP42YDL111C YBR062CP38239 180 aa2.75□□□□□ -1.97
RRP42YDL111C YFL064CP43540 174 aa2.75□□□□□ -1.97
RRP42YDL111C YPS5P53057 165 aa2.75□□□□□ -1.97
RRP42YDL111C NOP13P53883 403 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
RRP42YDL111C GTO3Q04806 366 aa2.75□□□□□ -1.97
RRP42YDL111C MHR1Q06630 226 aa2.75□□□□□ -1.97
RRP42YDL111C SNF8Q12483 233 aa2.75□□□□□ -1.97
RRP42YDL111C JIP3O13555 125 aa2.74□□□□□ -1.97
RRP42YDL111C MATALPHA1P0CY06 175 aa2.74□□□□□ -1.97
RRP42YDL111C HMLALPHA1P0CY07 175 aa2.74□□□□□ -1.97
RRP42YDL111C RPO26P20435 155 aa2.74□□□□□ -1.97
RRP42YDL111C EPT1P22140 391 aa2.74□□□□□ -1.97
RRP42YDL111C HOM6P31116 359 aaKnown RBP2.74□□□□□ -1.97
RRP42YDL111C QRI5P32344 111 aa2.74□□□□□ -1.97
RRP42YDL111C MRPL3P36516 390 aa2.74□□□□□ -1.97
RRP42YDL111C FRM2P37261 193 aa2.74□□□□□ -1.97
RRP42YDL111C MRP21P38175 177 aa2.74□□□□□ -1.97
RRP42YDL111C ATG12P38316 186 aa2.74□□□□□ -1.97
RRP42YDL111C KRE29P40026 464 aa2.74□□□□□ -1.97
RRP42YDL111C THO1P40040 218 aaKnown RBP2.74□□□□□ -1.97
RRP42YDL111C RRG9P40156 214 aa2.74□□□□□ -1.97
RRP42YDL111C GLG2P47011 380 aa2.74□□□□□ -1.97
RRP42YDL111C HOC1P47124 396 aa2.74□□□□□ -1.97
RRP42YDL111C NBP35P52920 328 aa2.74□□□□□ -1.97
RRP42YDL111C FMP48P53233 369 aa2.74□□□□□ -1.97
RRP42YDL111C SWS2P53937 143 aa2.74□□□□□ -1.97
RRP42YDL111C SPO77Q06134 477 aa2.74□□□□□ -1.97
RRP42YDL111C PPA2P28239 310 aa2.73□□□□□ -1.97
RRP42YDL111C MRPL27P36526 146 aaPredicted RBP2.73□□□□□ -1.97
RRP42YDL111C YER184CP39961 794 aa2.73□□□□□ -1.97
RRP42YDL111C SMB1P40018 196 aaKnown RBP2.73□□□□□ -1.97
RRP42YDL111C RPC17P47076 161 aa2.73□□□□□ -1.97
RRP42YDL111C HSH155P49955 971 aaKnown RBP2.73□□□□□ -1.97
RRP42YDL111C NBP1P52919 319 aaPredicted RBP2.73□□□□□ -1.97
RRP42YDL111C USE1P53146 245 aa2.73□□□□□ -1.97
RRP42YDL111C SDC1Q03323 175 aa2.73□□□□□ -1.97
RRP42YDL111C EBS1Q03466 884 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms