RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	ADE1	P27616	306 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	GAC1	P28006	793 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	LAC1	P28496	418 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	MRP4	P32902	394 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	TSA1	P34760	196 aa	Known RBP	5.68	□□□□□ -1.5
RSA4	YCR072C	MRPL4	P36517	319 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YBR063C	P38083	404 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	EHT1	P38295	451 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YHR033W	P38690	423 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	MDM31	P38880	579 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	GCV3	P39726	170 aa	Predicted RBP	5.68	□□□□□ -1.5
RSA4	YCR072C	SNM1	P40993	198 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YFL054C	P43549	646 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	LOC1	P43586	204 aa	Predicted RBP	5.68	□□□□□ -1.5
RSA4	YCR072C	IRC7	P43623	340 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	NET1	P47035	1189 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	BIT61	P47041	543 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YJR149W	P47177	404 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	NUP57	P48837	541 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	SDT1	P53078	280 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YGR012W	P53206	393 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	COQ6	P53318	479 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YNR071C	P53757	342 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	FMP41	P53889	259 aa	Known RBP	5.68	□□□□□ -1.5
RSA4	YCR072C	SAE3	P89114	91 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YDC1	Q02896	317 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	GIP3	Q03016	1276 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	VBA1	Q04301	562 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	MRI1	Q06489	411 aa	Known RBP	5.68	□□□□□ -1.5
RSA4	YCR072C	MRPL35	Q06678	367 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	JLP1	Q12358	412 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	YLR422W	Q06409	1932 aa		5.68	□□□□□ -1.5
RSA4	YCR072C	RPS9A	O13516	197 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	ADH3	P07246	375 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	SPO7	P18410	259 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	EHD3	P28817	500 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	MGM101	P32787	269 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	MSN4	P33749	630 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	COS9	P36034	407 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	DOA1	P36037	715 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	HMT1	P38074	348 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	RRN10	P38204	145 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	PHO90	P39535	881 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	GAT2	P40209	560 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	ICE2	P40499	491 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	YJR012C	P47087	207 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	AMA1	P50082	593 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	YGL101W	P53144	215 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	TIM21	P53220	239 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	YGR042W	P53227	271 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	SYF2	P53277	215 aa	Predicted RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	PDR16	P53860	351 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	RHO3	Q00245	231 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	APM1	Q00776	475 aa	Predicted RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	LEE1	Q02799	301 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	MSS11	Q03825	758 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	CTK1	Q03957	528 aa	Known RBP	5.67	□□□□□ -1.5
RSA4	YCR072C	ECM18	Q04623	453 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	AIM6	Q07716	390 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	GPM2	Q12008	311 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	HOS1	Q12214	470 aa		5.67	□□□□□ -1.5
RSA4	YCR072C	SIR2	P06700	562 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	YOL163W	P0CF20	169 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
RSA4	YCR072C	ERD2	P18414	219 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	AAT2	P23542	418 aa	Known RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	PRE7	P23724	241 aa	Known RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	YCP4	P25349	247 aa	Known RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	PMI40	P29952	429 aa	Known RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	MF(ALPHA)2	P32435	120 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	COX13	P32799	129 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	YPT7	P32939	208 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	CLB6	P32943	380 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	GMH1	P36125	273 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	DAD2	P36162	133 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	POP8	P38208	133 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	AIM3	P38266	947 aa	Known RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	YPT31	P38555	223 aa	Known RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	CHS7	P38843	316 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	YER158C	P40095	573 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	HMS2	P47175	358 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	NSA1	P53136	463 aa	Predicted RBP	5.66	□□□□□ -1.5
RSA4	YCR072C	TNA1	P53322	534 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	SAY1	P53324	424 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	GPI15	P53961	229 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	SWC7	Q06707	132 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	CSM4	Q08955	156 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	RRI1	Q12468	440 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	Q0144	Q9ZZW2	109 aa		5.66	□□□□□ -1.5
RSA4	YCR072C	SGA1	P08019	549 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	PEX4	P29340	183 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	TCA17	P32613	152 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	SNC2	P33328	115 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	SFK1	P35735	353 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	RTC2	P38279	296 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	MTC4	P38335	694 aa	Known RBP	5.65	□□□□□ -1.5
RSA4	YCR072C	GET2	P40056	285 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	RRG9	P40156	214 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	MPM1	P40364	252 aa		5.65	□□□□□ -1.5
RSA4	YCR072C	DPB11	P47027	764 aa	Predicted RBP	5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms