RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C VAM7P32912 316 aa5.09□□□□□ -1.59
PDB1YBR221C SKN1P33336 771 aa5.09□□□□□ -1.59
PDB1YBR221C MTR2P34232 184 aaKnown RBP5.09□□□□□ -1.59
PDB1YBR221C ANR2P36090 516 aaPredicted RBP5.09□□□□□ -1.59
PDB1YBR221C ECM13P38195 257 aa5.09□□□□□ -1.59
PDB1YBR221C YBP1P38315 674 aa5.09□□□□□ -1.59
PDB1YBR221C RPP1P38786 293 aa5.09□□□□□ -1.59
PDB1YBR221C PAC2P39937 518 aa5.09□□□□□ -1.59
PDB1YBR221C OXA1P39952 402 aa5.09□□□□□ -1.59
PDB1YBR221C YAT2P40017 923 aa5.09□□□□□ -1.59
PDB1YBR221C COG3P40094 801 aa5.09□□□□□ -1.59
PDB1YBR221C GDS1P41913 522 aa5.09□□□□□ -1.59
PDB1YBR221C ASG7P46993 209 aa5.09□□□□□ -1.59
PDB1YBR221C YJR079WP47126 109 aa5.09□□□□□ -1.59
PDB1YBR221C BRR6P53062 197 aa5.09□□□□□ -1.59
PDB1YBR221C GPI1P53306 609 aa5.09□□□□□ -1.59
PDB1YBR221C TPS1Q00764 495 aaKnown RBP5.09□□□□□ -1.59
PDB1YBR221C GIP3Q03016 1276 aa5.09□□□□□ -1.59
PDB1YBR221C YML108WQ03759 105 aa5.09□□□□□ -1.59
PDB1YBR221C VBA1Q04301 562 aa5.09□□□□□ -1.59
PDB1YBR221C SNT309Q06091 175 aaPredicted RBP5.09□□□□□ -1.59
PDB1YBR221C YLR036CQ07986 203 aa5.09□□□□□ -1.59
PDB1YBR221C MED7Q08278 222 aa5.09□□□□□ -1.59
PDB1YBR221C ENB1Q08299 606 aa5.09□□□□□ -1.59
PDB1YBR221C RPS10AQ08745 105 aaPredicted RBP5.09□□□□□ -1.59
PDB1YBR221C YLR050CQ12155 161 aaKnown RBP5.09□□□□□ -1.59
PDB1YBR221C NCE102Q12207 173 aaRIP-Chip data5.09□□□□□ -1.59not detected
PDB1YBR221C HMS1Q12398 434 aa5.09□□□□□ -1.59
PDB1YBR221C YLR361C-AQ3E795 98 aa5.09□□□□□ -1.59
PDB1YBR221C MEX67Q99257 599 aaKnown RBP5.09□□□□□ -1.59
PDB1YBR221C MOT1P32333 1867 aa5.09□□□□□ -1.6
PDB1YBR221C TUB1P09733 447 aaKnown RBP5.08□□□□□ -1.6
PDB1YBR221C YPK1P12688 680 aaKnown RBP5.08□□□□□ -1.6
PDB1YBR221C CHS2P14180 963 aa5.08□□□□□ -1.6
PDB1YBR221C ARF2P19146 181 aaKnown RBP5.08□□□□□ -1.6
PDB1YBR221C SAT4P25333 603 aaKnown RBP5.08□□□□□ -1.6
PDB1YBR221C ATO2P32907 282 aa5.08□□□□□ -1.6
PDB1YBR221C CSE2P33308 149 aa5.08□□□□□ -1.6
PDB1YBR221C CBP4P37267 147 aa5.08□□□□□ -1.6
PDB1YBR221C GOS1P38736 223 aa5.08□□□□□ -1.6
PDB1YBR221C RMD6P39975 231 aa5.08□□□□□ -1.6
PDB1YBR221C TIS11P47977 285 aa5.08□□□□□ -1.6
PDB1YBR221C ECL1P48235 211 aa5.08□□□□□ -1.6
PDB1YBR221C NUP57P48837 541 aa5.08□□□□□ -1.6
PDB1YBR221C UBP8P50102 471 aa5.08□□□□□ -1.6
PDB1YBR221C PLM2Q04383 521 aa5.08□□□□□ -1.6
PDB1YBR221C YML053CQ04978 212 aa5.08□□□□□ -1.6
PDB1YBR221C MHR1Q06630 226 aa5.08□□□□□ -1.6
PDB1YBR221C ASA1Q06822 443 aa5.08□□□□□ -1.6
PDB1YBR221C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
PDB1YBR221C MLH3Q12083 715 aa5.08□□□□□ -1.6
PDB1YBR221C ATG34Q12292 412 aa5.08□□□□□ -1.6
PDB1YBR221C AGC1Q12482 902 aa5.08□□□□□ -1.6
PDB1YBR221C FKS1P38631 1876 aaKnown RBP5.08□□□□□ -1.6
PDB1YBR221C SPT3P06844 337 aa5.07□□□□□ -1.6
PDB1YBR221C IMA3P0CW40 589 aa5.07□□□□□ -1.6
PDB1YBR221C IMA4P0CW41 589 aa5.07□□□□□ -1.6
PDB1YBR221C NMT1P14743 455 aa5.07□□□□□ -1.6
PDB1YBR221C CPR4P25334 318 aa5.07□□□□□ -1.6
PDB1YBR221C YCR101CP25607 182 aa5.07□□□□□ -1.6
PDB1YBR221C SEC1P30619 724 aaKnown RBP5.07□□□□□ -1.6
PDB1YBR221C ZRT1P32804 376 aa5.07□□□□□ -1.6
PDB1YBR221C FLO10P36170 1169 aa5.07□□□□□ -1.6
PDB1YBR221C YCR087C-AP37263 153 aa5.07□□□□□ -1.6
PDB1YBR221C WSC4P38739 605 aa5.07□□□□□ -1.6
PDB1YBR221C ANS1P38832 159 aa5.07□□□□□ -1.6
PDB1YBR221C RPS10BP46784 105 aaKnown RBP5.07□□□□□ -1.6
PDB1YBR221C IRC18P47056 224 aa5.07□□□□□ -1.6
PDB1YBR221C LYS5P50113 272 aa5.07□□□□□ -1.6
PDB1YBR221C NBP1P52919 319 aaPredicted RBP5.07□□□□□ -1.6
PDB1YBR221C NAM8Q00539 523 aaKnown RBP5.07□□□□□ -1.6
PDB1YBR221C HER2Q03557 464 aa5.07□□□□□ -1.6
PDB1YBR221C IMA2Q08295 589 aa5.07□□□□□ -1.6
PDB1YBR221C POM33Q12164 279 aa5.07□□□□□ -1.6
PDB1YBR221C YLL056CQ12177 298 aa5.07□□□□□ -1.6
PDB1YBR221C LCB4Q12246 624 aa5.07□□□□□ -1.6
PDB1YBR221C YOR338WQ99326 363 aa5.07□□□□□ -1.6
PDB1YBR221C GCN1P33892 2672 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C TPK3P05986 398 aa5.06□□□□□ -1.6
PDB1YBR221C RPS14AP06367 137 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C TYR1P20049 452 aa5.06□□□□□ -1.6
PDB1YBR221C SEC22P22214 214 aa5.06□□□□□ -1.6
PDB1YBR221C RSA4P25382 515 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C DCC1P25559 380 aa5.06□□□□□ -1.6
PDB1YBR221C MGT1P26188 188 aa5.06□□□□□ -1.6
PDB1YBR221C CAT2P32796 670 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C RPS1AP33442 255 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C MSN2P33748 704 aa5.06□□□□□ -1.6
PDB1YBR221C YKL187CP34231 750 aa5.06□□□□□ -1.6
PDB1YBR221C CSG2P35206 410 aa5.06□□□□□ -1.6
PDB1YBR221C JEN1P36035 616 aa5.06□□□□□ -1.6
PDB1YBR221C CTP1P38152 299 aa5.06□□□□□ -1.6
PDB1YBR221C MED8P38304 223 aa5.06□□□□□ -1.6
PDB1YBR221C GRE3P38715 327 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
PDB1YBR221C YHI9P38765 294 aa5.06□□□□□ -1.6
PDB1YBR221C RPS14BP39516 138 aaKnown RBP5.06□□□□□ -1.6
PDB1YBR221C YAL037WP39728 267 aa5.06□□□□□ -1.6
PDB1YBR221C HPM1P40481 377 aa5.06□□□□□ -1.6
PDB1YBR221C FMP32P43557 207 aa5.06□□□□□ -1.6
PDB1YBR221C GUF1P46943 645 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms