RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ALG13Q9NP73 1137 aaKnown RBP18.87■□□□□ 0.61
PHGDH-234ENST00000642041 CLDND1Q9NY35 253 aa18.87■□□□□ 0.61
PHGDH-234ENST00000642041 STX10O60499 249 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 SELPP16109 830 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 MARSP56192 900 aaKnown RBP18.86■□□□□ 0.61
PHGDH-234ENST00000642041 KRT31Q15323 416 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 KNOP1Q1ED39 458 aaKnown RBP18.86■□□□□ 0.61
PHGDH-234ENST00000642041 ARSHQ5FYA8 562 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 ANKRD40Q6AI12 368 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 FAM117BQ6P1L5 589 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 MCPH1Q8NEM0 835 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 OR6J1Q8NGC5 347 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 KIAA1524Q8TCG1 905 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 SAMD11Q96NU1 681 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 MED15Q96RN5 788 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 EDEM3Q9BZQ6 932 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 ST6GALNAC4Q9H4F1 302 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 NSUN3Q9H649 340 aaKnown RBP18.86■□□□□ 0.61
PHGDH-234ENST00000642041 RGL1Q9NZL6 768 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
PHGDH-234ENST00000642041 CACNA1BQ00975 2339 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 PHLPP2Q6ZVD8 1323 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 GOLGA6L9A6NEM1 432 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 LGALS16A8MUM7 142 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 H3BNC9 293 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 NBNO60934 754 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 KCNA2P16389 499 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 YWHABP31946 246 aaKnown RBP18.85■□□□□ 0.61
PHGDH-234ENST00000642041 LTBRP36941 435 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 MTIF2P46199 727 aaKnown RBP18.85■□□□□ 0.61
PHGDH-234ENST00000642041 SMTNP53814 917 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 ITGB3BPQ13352 177 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-234ENST00000642041 IKBKEQ14164 716 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 PTGISQ16647 500 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 TCTN1Q2MV58 587 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 EPC2Q52LR7 807 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 FIGNQ5HY92 759 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 FAM160B1Q5W0V3 765 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 LRRC8DQ7L1W4 858 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 HS2ST1Q7LGA3 356 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 FBXL6Q8N531 539 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 KIFAP3Q92845 792 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 ATOH1Q92858 354 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-234ENST00000642041 GJA10Q969M2 543 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 PANX2Q96RD6 677 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 REEP2Q9BRK0 252 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 TUBGCP2Q9BSJ2 902 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 MRPL44Q9H9J2 332 aaKnown RBP18.85■□□□□ 0.61
PHGDH-234ENST00000642041 TYW1Q9NV66 732 aaKnown RBP18.85■□□□□ 0.61
PHGDH-234ENST00000642041 DAAM1Q9Y4D1 1078 aa18.85■□□□□ 0.61
PHGDH-234ENST00000642041 RBM47A0AV96 593 aaKnown RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 AKR1B15C9JRZ8 316 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 MBTPS2O43462 519 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 ATG7O95352 703 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 SKILP12757 684 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 SLC26A2P50443 739 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 TBX2Q13207 712 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 MAN2A1Q16706 1144 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 XKR3Q5GH77 459 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 PADI6Q6TGC4 694 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 MYCT1Q8N699 235 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 ZNF397Q8NF99 534 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 SP7Q8TDD2 431 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 DUSP9Q99956 384 aaKnown RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 MKNK1Q9BUB5 465 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 NUCKS1Q9H1E3 243 aaKnown RBP18.84■□□□□ 0.61
PHGDH-234ENST00000642041 NRBP2Q9NSY0 501 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 EXOC7Q9UPT5 735 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 MAPK8IP1Q9UQF2 711 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 KMT2EQ8IZD2 1858 aa18.84■□□□□ 0.61
PHGDH-234ENST00000642041 A6NJR5 290 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 PROB1E7EW31 1015 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 ARHGAP6O43182 974 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 DGAT1O75907 488 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 RARRES1P49788 294 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 HTRA4P83105 476 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-234ENST00000642041 RBL2Q08999 1139 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 GPM6BQ13491 265 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 CTC1Q2NKJ3 1217 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 EPM2AIP1Q7L775 607 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-234ENST00000642041 APTXQ7Z2E3 356 aaKnown RBP18.83■□□□□ 0.6
PHGDH-234ENST00000642041 FRMD5Q7Z6J6 570 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 RPAINQ86UA6 219 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 FMNL3Q8IVF7 1028 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 ZC3H3Q8IXZ2 948 aaKnown RBP18.83■□□□□ 0.6
PHGDH-234ENST00000642041 KCNN1Q92952 543 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 ZFP91Q96JP5 570 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-234ENST00000642041 JPH2Q9BR39 696 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-234ENST00000642041 ZHX3Q9H4I2 956 aa18.83■□□□□ 0.6
PHGDH-234ENST00000642041 NKRFO15226 690 aaKnown RBP eCLIP18.82■□□□□ 0.6
PHGDH-234ENST00000642041 SLC16A3O15427 465 aaKnown RBP18.82■□□□□ 0.6
PHGDH-234ENST00000642041 ZSCAN12O43309 604 aa18.82■□□□□ 0.6
PHGDH-234ENST00000642041 GAS2O43903 313 aaKnown RBP18.82■□□□□ 0.6
PHGDH-234ENST00000642041 PBX1P40424 430 aa18.82■□□□□ 0.6
PHGDH-234ENST00000642041 UBXN1Q04323 297 aa18.82■□□□□ 0.6
PHGDH-234ENST00000642041 NOLC1Q14978 699 aaKnown RBP eCLIP18.82■□□□□ 0.6
PHGDH-234ENST00000642041 SCFD2Q8WU76 684 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms