RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 INCENPQ9NQS7 918 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 MAP3K20Q9NYL2 800 aaKnown RBP6.46□□□□□ -1.38
DNMT1-220ENST00000589351 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 INSL6Q9Y581 213 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 ABCB11O95342 1321 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 EMSYQ7Z589 1322 aa6.46□□□□□ -1.38
DNMT1-220ENST00000589351 SOWAHDA6NJG2 315 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 PRR33A8MZF0 331 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 PI4K2BG5E9Z4 385 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 ZNF213O14771 459 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 MMP3P08254 477 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 HSPD1P10809 573 aaKnown RBP6.45□□□□□ -1.38
DNMT1-220ENST00000589351 CKBP12277 381 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 PTGS1P23219 599 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 CD96P40200 585 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 ERVK-21P61565 698 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 RBL2Q08999 1139 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 ELOAQ14241 798 aaKnown RBP6.45□□□□□ -1.38
DNMT1-220ENST00000589351 LY6KQ17RY6 165 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 ANKRD45Q5TZF3 282 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 KRT40Q6A162 431 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 CCDC62Q6P9F0 684 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 SLC30A10Q6XR72 485 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 GJD3Q8N144 294 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 PLD6Q8N2A8 252 aaKnown RBP6.45□□□□□ -1.38
DNMT1-220ENST00000589351 SAMD3Q8N6K7 520 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 LRRN4CLQ8ND94 238 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 FAM84AQ96KN4 292 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 ALG1Q9BT22 464 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 UPF3BQ9BZI7 483 aaKnown RBP6.45□□□□□ -1.38
DNMT1-220ENST00000589351 UBE2ZQ9H832 354 aaPredicted RBP6.45□□□□□ -1.38
DNMT1-220ENST00000589351 MTUS1Q9ULD2 1270 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 MRVI1Q9Y6F6 885 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 LRRC37A2A6NM11 1700 aa6.45□□□□□ -1.38
DNMT1-220ENST00000589351 TTC28Q96AY4 2481 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 SCN5AQ14524 2016 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 LINC01553A4QN01 128 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 EPOPA6NHQ4 379 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 METTL12A8MUP2 240 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 NCK2O43639 380 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 CFBP00751 764 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 CXCL10P02778 98 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 PDGFAP04085 211 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 SNHG28P0DPA3 235 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 TGFB3P10600 412 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 GNAT1P11488 350 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 MAOBP27338 520 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 ASPAP45381 313 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 ARHGAP1Q07960 439 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 KIAA0753Q2KHM9 967 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 LEXMQ3ZCV2 418 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 ASPRV1Q53RT3 343 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 C20orf194Q5TEA3 1177 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 VPS53Q5VIR6 699 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 FAM178BQ8IXR5 827 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 SYTL5Q8TDW5 730 aaPredicted RBP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 GDPD5Q8WTR4 605 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 TAAR1Q96RJ0 339 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 UIMC1Q96RL1 719 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 LNPKQ9C0E8 428 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 UBA5Q9GZZ9 404 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 KCNH6Q9H252 994 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 GSX1Q9H4S2 264 aaPredicted RBP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 MLXIPQ9HAP2 919 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 VAT1LQ9HCJ6 419 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 HDAC6Q9UBN7 1215 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 SEPT3Q9UH03 358 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 DDX41Q9UJV9 622 aaKnown RBP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 SPTBN5Q9NRC6 3674 aaKnown RBP6.44□□□□□ -1.38
DNMT1-220ENST00000589351 ZMYM6O95789 1325 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 SCN10AQ9Y5Y9 1956 aa6.44□□□□□ -1.38
DNMT1-220ENST00000589351 CHD9Q3L8U1 2897 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 C17orf102A2RUQ5 167 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 LCHNA4D1U4 455 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 ANKRD33BA6NCL7 494 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 RSPH10B2B2RC85 870 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 LPXNO60711 386 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 NBNO60934 754 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 ARIH2O95376 493 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 PARP1P09874 1014 aaKnown RBP6.43□□□□□ -1.38
DNMT1-220ENST00000589351 RSPH10BP0C881 870 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 GOLGA8HP0CJ92 632 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 MYCLP12524 364 aaPredicted RBP6.43□□□□□ -1.38
DNMT1-220ENST00000589351 KCNA5P22460 613 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 CFPP27918 469 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 THPOP40225 353 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 HAND2P61296 217 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 DEFB103AP81534 67 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 GPM6BQ13491 265 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 CDC37Q16543 378 aaPredicted RBP6.43□□□□□ -1.38
DNMT1-220ENST00000589351 TIGD5Q53EQ6 642 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 ZNF618Q5T7W0 954 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 LILRA6Q6PI73 481 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 EP400NLQ6ZTU2 488 aa6.43□□□□□ -1.38
DNMT1-220ENST00000589351 RASGRP2Q7LDG7 609 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms