RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 RELNP78509 3460 aa10.73□□□□□ -0.69
PPP1R3E-204ENST00000559942 CCDC194A0A1B0GVG4 234 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 PATE3B3GLJ2 98 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 TEX28O15482 410 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 GALTP07902 379 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 SEMA3FQ13275 785 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 DSC3Q14574 896 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 VPS53Q5VIR6 699 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 Q6ZS52 159 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 BRD9Q9H8M2 597 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 FOXD4L1Q9NU39 408 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 PCDHA2Q9Y5H9 948 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 PCDHA1Q9Y5I3 950 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 PIAS3Q9Y6X2 628 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 ZMYM2Q9UBW7 1377 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 EVPLQ92817 2033 aa10.72□□□□□ -0.69
PPP1R3E-204ENST00000559942 COL5A1P20908 1838 aaPredicted RBP10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 CCNE1P24864 410 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 TCF7P36402 384 aaPredicted RBP10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 NTHL1P78549 312 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 LMAN2Q12907 356 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 SERINC3Q13530 473 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 HNRNPDQ14103 355 aaKnown RBP10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 GNPTABQ3T906 1256 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 LRRK2Q5S007 2527 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 ECHDC2Q86YB7 292 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 ZNF280BQ86YH2 543 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 PNPLA1Q8N8W4 532 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 WHAMMQ8TF30 809 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 TMEM40Q8WWA1 233 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 NOTCH4Q99466 2003 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 LRRCC1Q9C099 1032 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 JMJD4Q9H9V9 463 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 ERAP1Q9NZ08 941 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 DNMT3LQ9UJW3 386 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 ANAPC4Q9UJX5 808 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 SSX2IPQ9Y2D8 614 aa10.71□□□□□ -0.69
PPP1R3E-204ENST00000559942 SPATA31C2B4DYI2 1134 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 ERVH48-1M5A8F1 160 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 URODP06132 367 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 INSRRP14616 1297 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 MAPK8P45983 427 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 HAND2P61296 217 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 MRPS9P82933 396 aaKnown RBP10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 DGKKQ5KSL6 1271 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 PDXDC1Q6P996 788 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 LRRC69Q6ZNQ3 347 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 PALB2Q86YC2 1186 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 ITFG1Q8TB96 612 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 TRAPPC12Q8WVT3 735 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 IRF7Q92985 503 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 RPS6KC1Q96S38 1066 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 SLC4A5Q9BY07 1137 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 MGAQ8IWI9 3026 aa10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
PPP1R3E-204ENST00000559942 SMIM35A0A1B0GVV1 85 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 TRABD2BA6NFA1 517 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 ZMYND10O75800 440 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 FGRP09769 529 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 FTH1P19P0C7X4 201 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 C6P13671 934 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 FAM228AQ86W67 206 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 HDDC3Q8N4P3 179 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 WBP1Q96G27 269 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 TTC14Q96N46 770 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 PPP1R16BQ96T49 567 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 AMNQ9BXJ7 453 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 NRDE2Q9H7Z3 1164 aa10.69□□□□□ -0.7
PPP1R3E-204ENST00000559942 ATMQ13315 3056 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 FIBPO43427 364 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 TGM5O43548 720 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 EXTL3O43909 919 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 PPP1R11O60927 126 aaPredicted RBP10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 C1RP00736 705 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 GRM2Q14416 872 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 TRIP6Q15654 476 aaKnown RBP10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 TANGO2Q6ICL3 276 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 PLEKHM2Q8IWE5 1019 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 INPP4AQ96PE3 977 aaPredicted RBP10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 TRMT61BQ9BVS5 477 aaKnown RBP10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 SEMA4CQ9C0C4 833 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 ZNF334Q9HCZ1 680 aaPredicted RBP10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 TRPV5Q9NQA5 729 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 SPTBN1Q01082 2364 aaKnown RBP10.68□□□□□ -0.7
PPP1R3E-204ENST00000559942 BAZ2BQ9UIF8 2168 aaKnown RBP10.67□□□□□ -0.7
PPP1R3E-204ENST00000559942 USP9YO00507 2555 aaPredicted RBP10.67□□□□□ -0.7
PPP1R3E-204ENST00000559942 ADAMTS9Q9P2N4 1935 aa10.67□□□□□ -0.7
PPP1R3E-204ENST00000559942 GSTTP1A0A1W2PQM5 241 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms