RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PTPRJQ12913 1337 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 PLXNA3P51805 1871 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 AKAP3O75969 853 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 GNAT1P11488 350 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 GARTP22102 1010 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 CASP4P49662 377 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 EFNA5P52803 228 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 NAB2Q15742 525 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 KIZQ2M2Z5 673 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 SASS6Q6UVJ0 657 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 AOPEPQ8N6M6 819 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
LINC00517-202ENST00000554257 PAWRQ96IZ0 340 aaKnown RBP7.42□□□□□ -1.22
LINC00517-202ENST00000554257 OSMRQ99650 979 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 C2orf40Q9H1Z8 148 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 CDH23Q9H251 3354 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 RPLP2P05387 115 aaKnown RBP7.42□□□□□ -1.22
LINC00517-202ENST00000554257 ATP1A3P13637 1013 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 ABCD1P33897 745 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 TMEM192Q8IY95 271 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 CAGE1Q8TC20 777 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 CEP63Q96MT8 703 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 ACCSQ96QU6 501 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 SUGCTQ9HAC7 445 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 FANCLQ9NW38 375 aa7.42□□□□□ -1.22
LINC00517-202ENST00000554257 CPSF3Q9UKF6 684 aaKnown RBP7.42□□□□□ -1.22
LINC00517-202ENST00000554257 MROH7Q68CQ1 1323 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 SLC16A3O15427 465 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 CSDE1O75534 798 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 NR3C1P04150 777 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 PRKCBP05771 671 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 FGFR4P22455 802 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 ZNF165P49910 485 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 TMEM62Q0P6H9 643 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 PLEKHG4Q58EX7 1191 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 FILIP1Q7Z7B0 1213 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 TRIM59Q8IWR1 403 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 ZNF668Q96K58 619 aaPredicted RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 TMEM206Q9H813 350 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 PCDHB13Q9Y5F0 798 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 SRGAP2CP0DJJ0 459 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 FAM189BP81408 668 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 CDC42EP1Q00587 391 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 MYL5Q02045 173 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 MRPL10Q7Z7H8 261 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 NELFCDQ8IXH7 590 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 METTL13Q8N6R0 699 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 GSTCDQ8NEC7 633 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 LMO3Q8TAP4 145 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 TARS2Q9BW92 718 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 CDT1Q9H211 546 aa7.41□□□□□ -1.22
LINC00517-202ENST00000554257 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 PRMT7Q9NVM4 692 aaPredicted RBP7.41□□□□□ -1.22
LINC00517-202ENST00000554257 A0A1B0GTH6 734 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 H0YCG3 227 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 PMM2O15305 246 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 TFRCP02786 760 aaKnown RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 PHKA2P46019 1235 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 POU5F1Q01860 360 aaKnown RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 TCP11X2Q5H9J9 407 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 ZNF516Q92618 1163 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 CPB2Q96IY4 423 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 IFT74Q96LB3 600 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 NLRP4Q96MN2 994 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 EIF2AQ9BY44 585 aaKnown RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 HSPBP1Q9NZL4 362 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 PCDH10Q9P2E7 1040 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 LRRIQ4A6NIV6 560 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 KRT18P05783 430 aaKnown RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 TNFSF9P41273 254 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 STX17P56962 302 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 TFDP1Q14186 410 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 ZBTB6Q15916 424 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 C16orf59Q7L2K0 433 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 TMEM130Q8N3G9 435 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 OLIG1Q8TAK6 271 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 NAP1L5Q96NT1 182 aaPredicted RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 MKNK1Q9BUB5 465 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 FAM49AQ9H0Q0 323 aaPredicted RBP7.4□□□□□ -1.22
LINC00517-202ENST00000554257 GBP3Q9H0R5 595 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 NFE2L3Q9Y4A8 694 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 DENND4CQ5VZ89 1909 aa7.4□□□□□ -1.22
LINC00517-202ENST00000554257 TOM1L1O75674 476 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 EFEMP2O95967 443 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 LINC00271P0C7V0 271 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 TMOD1P28289 359 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 AXLP30530 894 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 DLG4P78352 724 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 NR1I3Q14994 352 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 MPZL3Q6UWV2 235 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 CCDC34Q96HJ3 373 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 PPP1R16BQ96T49 567 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 TTYH3Q9C0H2 523 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 KCNG1Q9UIX4 513 aa7.4□□□□□ -1.23
LINC00517-202ENST00000554257 SPTBN5Q9NRC6 3674 aaKnown RBP7.4□□□□□ -1.23
LINC00517-202ENST00000554257 MTCL1Q9Y4B5 1905 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 420.2 ms