RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 KCT2Q8NC54 265 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FBXO15Q8NCQ5 510 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 AFAP1L1Q8TED9 768 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 P2RX5Q93086 422 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 IL17RAQ96F46 866 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CCDC97Q96F63 343 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 NELL2Q99435 816 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 WDR18Q9BV38 432 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 SEMA4CQ9C0C4 833 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 OSBPL5Q9H0X9 879 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 MROH8Q9H579 483 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 PRMT8Q9NR22 394 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 TCP11L1Q9NUJ3 509 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FAM105AQ9NUU6 356 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 PCDHGA5Q9Y5G8 931 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 FLNAP21333 2647 aaKnown RBP2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 LAMA1P25391 3075 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 MGAQ8IWI9 3026 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CELSR1Q9NYQ6 3014 aa2.76□□□□□ -1.97
TRAV1-1-201ENST00000542354 CELSR2Q9HCU4 2923 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 ROCK2O75116 1388 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 NID2Q14112 1375 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 TSC2P49815 1807 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 NCANO14594 1321 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 RTTNQ86VV8 2226 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CLEC18AA5D8T8 446 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 TCAF2A6NFQ2 919 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 PRRG2O14669 202 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 EREGO14944 169 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 PDE8AO60658 829 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 RNGTTO60942 597 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 FAM155BO75949 473 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CXCL10P02778 98 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 GLI1P08151 1106 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 MMP3P08254 477 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 HMOX1P09601 288 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZSCAN22P10073 491 aaPredicted RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CD8BP10966 210 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 ERCC3P19447 782 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 IL13P35225 146 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 IGHMBP2P38935 993 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 PSMC6P62333 389 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 RBM10P98175 930 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 BEX3Q00994 111 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 AIMP1Q12904 312 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 UBXN2BQ14CS0 331 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 PTPN14Q15678 1187 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 DUSP6Q16828 381 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 DCAF6Q58WW2 860 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZNF746Q6NUN9 644 aaPredicted RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 SLC4A10Q6U841 1118 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CLEC18BQ6UXF7 455 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 NOL8Q76FK4 1167 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 SLC44A3Q8N4M1 653 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CLEC18CQ8NCF0 446 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 LRRN4CLQ8ND94 238 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 VN1R2Q8NFZ6 395 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CAGE1Q8TC20 777 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 SPPL3Q8TCT6 385 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 STK32AQ8WU08 396 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 TBC1D22AQ8WUA7 517 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 POF1BQ8WVV4 589 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 TOP1MTQ969P6 601 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 MYADMQ96S97 322 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 MOV10L1Q9BXT6 1211 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 EMILIN2Q9BXX0 1053 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 AP5M1Q9H0R1 490 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CHRDQ9H2X0 955 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CBX8Q9HC52 389 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 TMEM9BQ9NQ34 198 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 C1GALT1Q9NS00 363 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 MBNL3Q9NUK0 354 aaKnown RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 BTBD7Q9P203 1132 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZHX1Q9UKY1 873 aaPredicted RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 POLIQ9UNA4 740 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 SAMM50Q9Y512 469 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 PTPRSQ13332 1948 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 GREB1Q4ZG55 1949 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CRYBG3Q68DQ2 2970 aa2.75□□□□□ -1.97
TRAV1-1-201ENST00000542354 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CCDC194A0A1B0GVG4 234 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 TRABD2BA6NFA1 517 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ZBTB39O15060 712 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CTAGE5O15320 804 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 EPN2O95208 641 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 DNAJB1P25685 340 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 CAP2P40123 477 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 EIF2S3P41091 472 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 RPS9P46781 194 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ADCY1Q08828 1119 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 NFATC3Q12968 1075 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 ACVR2BQ13705 512 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 KCNC3Q14003 757 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 HNRNPDQ14103 355 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 GPNMBQ14956 572 aa2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 NOLC1Q14978 699 aaKnown RBP eCLIP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 FSCN1Q16658 493 aaKnown RBP2.74□□□□□ -1.97
TRAV1-1-201ENST00000542354 UAP1L1Q3KQV9 507 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms