RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RIN2Q8WYP3 895 aaPredicted RBP19.37■□□□□ 0.69
GNE-204ENST00000539208 ARHGEF26Q96DR7 871 aa19.37■□□□□ 0.69
GNE-204ENST00000539208 TMEM8AQ9HCN3 771 aa19.37■□□□□ 0.69
GNE-204ENST00000539208 A1CFQ9NQ94 594 aaKnown RBP19.37■□□□□ 0.69
GNE-204ENST00000539208 TMOD4Q9NZQ9 345 aa19.37■□□□□ 0.69
GNE-204ENST00000539208 KIAA1217Q5T5P2 1943 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 GOLGA8IPA6NC78 632 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 ZSCAN5CA6NGD5 496 aaPredicted RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 GOLGA8JA6NMD2 632 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 GOLGA8KD6RF30 607 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 DDX3YO15523 660 aaKnown RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 GZMAP12544 262 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 GPC3P51654 580 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 MFAP3P55082 362 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 CUL1Q13616 776 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 GNPTABQ3T906 1256 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 TRMT1LQ7Z2T5 733 aaKnown RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 IFT81Q8WYA0 676 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 SLITRK6Q9H5Y7 841 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 SEPT11Q9NVA2 429 aaKnown RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 CALCOCO1Q9P1Z2 691 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 PPP1R1BQ9UD71 204 aaPredicted RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 KCNG1Q9UIX4 513 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 H0YCG3 227 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 KRIT1O00522 736 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 SART1O43290 800 aaKnown RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 HSF2BPO75031 334 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 RTN2O75298 545 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 RPS6KA5O75582 802 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 GARTP22102 1010 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 ACTN2P35609 894 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 CLUL1Q15846 466 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 BRDTQ58F21 947 aaPredicted RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 PRAMEF18Q5VWM3 479 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 SLC39A4Q6P5W5 647 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 SHC3Q92529 594 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 CARD9Q9H257 536 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 NOCTQ9UK39 431 aaKnown RBP19.36■□□□□ 0.69
GNE-204ENST00000539208 AFG3L2Q9Y4W6 797 aa19.36■□□□□ 0.69
GNE-204ENST00000539208 LOC285556D6RIA3 1793 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 ESYT3A0FGR9 886 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 FTLP02792 175 aaPredicted RBP19.35■□□□□ 0.69
GNE-204ENST00000539208 ACTR2P61160 394 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 MAP2K1Q02750 393 aaPredicted RBP19.35■□□□□ 0.69
GNE-204ENST00000539208 SH3D19Q5HYK7 790 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 C11orf63Q6NUN7 778 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 RPUSD2Q8IZ73 545 aaKnown RBP19.35■□□□□ 0.69
GNE-204ENST00000539208 KCNN1Q92952 543 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 SAAL1Q96ER3 474 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 KREMEN1Q96MU8 473 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 KIFC3Q9BVG8 833 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 CYP26B1Q9NR63 512 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 COG5Q9UP83 839 aa19.35■□□□□ 0.69
GNE-204ENST00000539208 FAM153BP0C7A2 387 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 CAPN2P17655 700 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 GPC5P78333 572 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 PPFIA1Q13136 1202 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 FAM153CQ494X1 144 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 MIS18BP1Q6P0N0 1132 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 IQCKQ8N0W5 287 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 EPS8L1Q8TE68 723 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 SEMA4DQ92854 862 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 ATP6V0A4Q9HBG4 840 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 XPNPEP1Q9NQW7 623 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 FAM153AQ9UHL3 310 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 SPDYE16A6NNV3 312 aaPredicted RBP19.34■□□□□ 0.69
GNE-204ENST00000539208 MTA2O94776 668 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 SCP2P22307 547 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 PRKCEQ02156 737 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 CYP24A1Q07973 514 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 PTPROQ16827 1216 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 XKR3Q5GH77 459 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 CCDC60Q8IWA6 550 aaPredicted RBP19.34■□□□□ 0.69
GNE-204ENST00000539208 FBXL13Q8NEE6 735 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 KAT5Q92993 513 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
GNE-204ENST00000539208 AP1M1Q9BXS5 423 aa19.34■□□□□ 0.69
GNE-204ENST00000539208 SGPL1O95470 568 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 CHRNB2P17787 502 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 ICAM3P32942 547 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 HNRNPH2P55795 449 aaKnown RBP19.33■□□□□ 0.69
GNE-204ENST00000539208 ERVK-9P63128 1117 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 PPP2R5EQ16537 467 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 MAATS1Q7Z4T9 603 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 GPD1LQ8N335 351 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 DNERQ8NFT8 737 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 CCDC26Q8TAB7 109 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 HELQQ8TDG4 1101 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 CCDC127Q96BQ5 260 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 IFT74Q96LB3 600 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 GPRC5DQ9NZD1 345 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 ARHGAP28Q9P2N2 729 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 FZD1Q9UP38 647 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 ADGRA3Q8IWK6 1321 aa19.33■□□□□ 0.69
GNE-204ENST00000539208 SSC5DA1L4H1 1573 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 GOLGA6CA6NDK9 693 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms