RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KCNMB3Q9NPA1 279 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 KLHL11Q9NVR0 708 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 STK17AQ9UEE5 414 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 CCNL1Q9UK58 526 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 KCPQ6ZWJ8 1503 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 A0A0G2JND7 137 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 FOXN3O00409 490 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 BAG2O95816 211 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 NR3C1P04150 777 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 DNAJC9Q8WXX5 260 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 IQCDQ96DY2 449 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 PGM2Q96G03 612 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 LRRC37BQ96QE4 947 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 MTMR9Q96QG7 549 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 REEP2Q9BRK0 252 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 MTA3Q9BTC8 594 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 DENND2DQ9H6A0 471 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 UBN1Q9NPG3 1134 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 ARHGEF3Q9NR81 526 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 COL1A1P02452 1464 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 MYH3P11055 1940 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 LRP6O75581 1613 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 PALM3A6NDB9 673 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 EDIL3O43854 480 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KRT36O76013 467 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SCNN1BP51168 640 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RPS6KA3P51812 740 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KRT17Q04695 432 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RCN1Q15293 331 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 TAF1BQ53T94 588 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ARSHQ5FYA8 562 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 DSTYKQ6XUX3 929 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 DGKHQ86XP1 1220 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 C1orf131Q8NDD1 294 aaKnown RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ANKRD2Q9GZV1 360 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KCTD10Q9H3F6 313 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 MAGEF1Q9HAY2 307 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RXFP1Q9HBX9 757 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 UBE2TQ9NPD8 197 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SH3GLB2Q9NR46 395 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CHST7Q9NS84 486 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 STXBP5LQ9Y2K9 1186 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ALS2Q96Q42 1657 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 PHRF1Q9P1Y6 1649 aaKnown RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SMAPO00193 183 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 PEX11AO75192 247 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 LDHCP07864 332 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RASA1P20936 1047 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 PEX5P50542 639 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KLC1Q07866 573 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RIPK1Q13546 671 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SEL1L2Q5TEA6 688 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KAZNQ674X7 775 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 FBXO33Q7Z6M2 555 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 MYCT1Q8N699 235 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 B4GALNT2Q8NHY0 566 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CYP2W1Q8TAV3 490 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RFFLQ8WZ73 363 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 RNPEPL1Q9HAU8 725 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ZNF287Q9HBT7 754 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KIF1AQ12756 1690 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 BCL9O00512 1426 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 MYO3BQ8WXR4 1341 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 USP17L10C9JJH3 530 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 BANF1O75531 89 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 UNC5CO95185 931 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 TPBGLP0DKB5 382 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CALB2P22676 271 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ITGA8P53708 1063 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 KNOP1Q1ED39 458 aaKnown RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 EPM2AIP1Q7L775 607 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 MTDHQ86UE4 582 aaKnown RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 PROM2Q8N271 834 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SLC25A41Q8N5S1 370 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 TBC1D16Q8TBP0 767 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SYN2Q92777 582 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CENPTQ96BT3 561 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 HAUS1Q96CS2 278 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 EPAS1Q99814 870 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 EDEM3Q9BZQ6 932 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 NAALADL1Q9UQQ1 740 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 CHKBQ9Y259 395 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
NEDD9-208ENST00000504387 SPEF2Q9C093 1822 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 ANKRD62A6NC57 917 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 KLHL33A6NCF5 533 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 ATP9AO75110 1047 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 ZBED4O75132 1171 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 GYS1P13807 737 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 HOXD13P35453 343 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 ZBTB16Q05516 673 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms