RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 PRAMEF4O60810 478 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 GZMKP49863 264 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 MRPL49Q13405 166 aaKnown RBP7.47□□□□□ -1.21
MDM2-220ENST00000496959 FHL2Q14192 279 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 FAM214AQ32MH5 1076 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 HTR3DQ70Z44 454 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 GLB1L3Q8NCI6 653 aaPredicted RBP7.47□□□□□ -1.21
MDM2-220ENST00000496959 RAX2Q96IS3 184 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 PDCD2LQ9BRP1 358 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 PRDM12Q9H4Q4 367 aa7.47□□□□□ -1.21
MDM2-220ENST00000496959 DNAJC6O75061 913 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 ADH4P08319 380 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 HK1P19367 917 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 ENPP1P22413 925 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 FAPQ12884 760 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 TOB2Q14106 344 aaPredicted RBP7.46□□□□□ -1.22
MDM2-220ENST00000496959 C19orf54Q5BKX5 351 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 RABL3Q5HYI8 236 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 METTL24Q5JXM2 366 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 FNDC7Q5VTL7 733 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 NAIF1Q69YI7 327 aaPredicted RBP7.46□□□□□ -1.22
MDM2-220ENST00000496959 IQSEC1Q6DN90 963 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 MMRN2Q9H8L6 949 aa7.46□□□□□ -1.22
MDM2-220ENST00000496959 CFBP00751 764 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
MDM2-220ENST00000496959 TGFB2P61812 414 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.45□□□□□ -1.22
MDM2-220ENST00000496959 C1QL3Q5VWW1 255 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 AFAP1L2Q8N4X5 818 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 SNX33Q8WV41 574 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 CDC5LQ99459 802 aaKnown RBP7.45□□□□□ -1.22
MDM2-220ENST00000496959 SLC2A4RGQ9NR83 387 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 ING1Q9UK53 422 aaPredicted RBP7.45□□□□□ -1.22
MDM2-220ENST00000496959 RB1CC1Q8TDY2 1594 aa7.45□□□□□ -1.22
MDM2-220ENST00000496959 GOLGA8AA7E2F4 631 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 FAM20BO75063 409 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 CNGA1P29973 690 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 SLC25A3Q00325 362 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 APBA1Q02410 837 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 DOK3Q7L591 496 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 KRT26Q7Z3Y9 468 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 AMER2Q8N7J2 671 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 NEU4Q8WWR8 484 aaPredicted RBP7.44□□□□□ -1.22
MDM2-220ENST00000496959 TMX1Q9H3N1 280 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 DPP7Q9UHL4 492 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 EDARQ9UNE0 448 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 CLCA2Q9UQC9 943 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 PRKAB1Q9Y478 270 aa7.44□□□□□ -1.22
MDM2-220ENST00000496959 RECQL4O94761 1208 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 CTSSP25774 331 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 PTGS2P35354 604 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 STAT4Q14765 748 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 ABHD15Q6UXT9 468 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 SLC25A43Q8WUT9 341 aaPredicted RBP7.43□□□□□ -1.22
MDM2-220ENST00000496959 CLIP3Q96DZ5 547 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 TRIM8Q9BZR9 551 aa7.43□□□□□ -1.22
MDM2-220ENST00000496959 PRR5-ARHGAP8B1AHC4 643 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 PHF2O75151 1096 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 TMEM127O75204 238 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 RPS6KA4O75676 772 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 GASTP01350 101 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 MRPS9P82933 396 aaKnown RBP7.42□□□□□ -1.22
MDM2-220ENST00000496959 CDK17Q00537 523 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 VPS72Q15906 364 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
MDM2-220ENST00000496959 OR52N2Q8NGI0 321 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 FAM193BQ96PV7 902 aaPredicted RBP7.42□□□□□ -1.22
MDM2-220ENST00000496959 LSM14BQ9BX40 385 aaKnown RBP7.42□□□□□ -1.22
MDM2-220ENST00000496959 TRPS1Q9UHF7 1281 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.42□□□□□ -1.22
MDM2-220ENST00000496959 SORCS3Q9UPU3 1222 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 RPTORQ8N122 1335 aa7.42□□□□□ -1.22
MDM2-220ENST00000496959 ITGA10O75578 1167 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 EYA4O95677 639 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 VIL1P09327 827 aaKnown RBP7.41□□□□□ -1.22
MDM2-220ENST00000496959 MTHFD2P13995 350 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 FAM180AQ6UWF9 173 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 ZNF276Q8N554 614 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 LMBR1Q8WVP7 490 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 AUTS2Q8WXX7 1259 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 HAS1Q92839 578 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 NRDE2Q9H7Z3 1164 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 GPRC5DQ9NZD1 345 aa7.41□□□□□ -1.22
MDM2-220ENST00000496959 EIF2B4Q9UI10 523 aaKnown RBP7.41□□□□□ -1.22
MDM2-220ENST00000496959 TRIM24O15164 1050 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 SCAND1P57086 179 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 XYLT1Q86Y38 959 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 SYNE4Q8N205 404 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 WDR66Q8TBY9 1149 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 CPT1CQ8TCG5 803 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 TGFBRAP1Q8WUH2 860 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 ZNF480Q8WV37 535 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 CPEB1Q9BZB8 566 aaKnown RBP7.4□□□□□ -1.22
MDM2-220ENST00000496959 QRSL1Q9H0R6 528 aaKnown RBP7.4□□□□□ -1.22
MDM2-220ENST00000496959 GPRC5BQ9NZH0 403 aa7.4□□□□□ -1.22
MDM2-220ENST00000496959 ZMYM3Q14202 1370 aa7.39□□□□□ -1.23
MDM2-220ENST00000496959 WDR33Q9C0J8 1336 aaKnown RBP7.39□□□□□ -1.23
MDM2-220ENST00000496959 GRXCR1A8MXD5 290 aa7.39□□□□□ -1.23
MDM2-220ENST00000496959 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms