RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 SLKQ9H2G2 1235 aaPredicted RBP6.29□□□□□ -1.4
NF1-214ENST00000490416 IFT22Q9H7X7 185 aa6.29□□□□□ -1.4
NF1-214ENST00000490416 EVLQ9UI08 416 aaPredicted RBP6.29□□□□□ -1.4
NF1-214ENST00000490416 EIF2B4Q9UI10 523 aaKnown RBP6.29□□□□□ -1.4
NF1-214ENST00000490416 TMEM191CA6NGB0 347 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 ZEB2O60315 1214 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 PRAMEF4O60810 478 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 PPFIA4O75335 1185 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 ULK1O75385 1050 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 BPIP17213 487 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 MEF2AQ02078 507 aaPredicted RBP6.28□□□□□ -1.4
NF1-214ENST00000490416 DOK3Q7L591 496 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
NF1-214ENST00000490416 LDLRAD3Q86YD5 345 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 ULK2Q8IYT8 1036 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 MSL3Q8N5Y2 521 aaKnown RBP6.28□□□□□ -1.4
NF1-214ENST00000490416 PAWRQ96IZ0 340 aaKnown RBP6.28□□□□□ -1.4
NF1-214ENST00000490416 CDC5LQ99459 802 aaKnown RBP6.28□□□□□ -1.4
NF1-214ENST00000490416 TTC1Q99614 292 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 USP35Q9P2H5 1018 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
NF1-214ENST00000490416 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
NF1-214ENST00000490416 PRR5-ARHGAP8B1AHC4 643 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 TRIM24O15164 1050 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 RAMP2O60895 175 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 SCAF4O95104 1147 aaKnown RBP6.27□□□□□ -1.41
NF1-214ENST00000490416 CFBP00751 764 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 LGALS4P56470 323 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 SESN3P58005 492 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
NF1-214ENST00000490416 VPS72Q15906 364 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 CT83Q5H943 113 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 PITRM1Q5JRX3 1037 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 ZNF627Q7L945 461 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 LYSMD2Q8IV50 215 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 OR52N2Q8NGI0 321 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 LENG9Q96B70 501 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 KCTD10Q9H3F6 313 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 CDY2AQ9Y6F7 541 aa6.27□□□□□ -1.41
NF1-214ENST00000490416 GRXCR1A8MXD5 290 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 OVOL3O00110 214 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 NEMP1O14524 444 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 LPLP06858 475 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 INHBEP58166 350 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 APBA1Q02410 837 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 UGT8Q16880 541 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 C19orf54Q5BKX5 351 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 IQSEC1Q6DN90 963 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 MRGPREQ86SM8 312 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 SLC41A1Q8IVJ1 513 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 ACAP3Q96P50 834 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 FZD1Q9UP38 647 aa6.26□□□□□ -1.41
NF1-214ENST00000490416 APOBEC2Q9Y235 224 aaKnown RBP6.26□□□□□ -1.41
NF1-214ENST00000490416 ITGB1P05556 798 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 SOX5P35711 763 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 STRN3Q13033 797 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 PTPAQ15257 358 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 SMN1Q16637 294 aaKnown RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 LY6G5CQ5SRR4 150 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 PDZD4Q76G19 769 aaPredicted RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 RNF180Q86T96 592 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 SNX33Q8WV41 574 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 NDC1Q9BTX1 674 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 TTPALQ9BTX7 342 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 LSM14BQ9BX40 385 aaKnown RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 CPEB1Q9BZB8 566 aaKnown RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 KCNH6Q9H252 994 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 PRDM12Q9H4Q4 367 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 SPON1Q9HCB6 807 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 TOPORSQ9NS56 1045 aaPredicted RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 ABHD16AO95870 558 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 ID4P47928 161 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 PDCD1Q15116 288 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 FSCN1Q16658 493 aaKnown RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 TIGD2Q4W5G0 525 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 LAIR1Q6GTX8 287 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 KCNV1Q6PIU1 500 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 XYLT1Q86Y38 959 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 THNSL2Q86YJ6 484 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 PROKR1Q8TCW9 393 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 RAX2Q96IS3 184 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 DCLRE1CQ96SD1 692 aaKnown RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 CAAP1Q9H8G2 361 aa6.25□□□□□ -1.41
NF1-214ENST00000490416 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
NF1-214ENST00000490416 FOXN1O15353 648 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 TMEM127O75204 238 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 GASTP01350 101 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 LAG3P18627 525 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 APOBEC3AP31941 199 aaPredicted RBP6.24□□□□□ -1.41
NF1-214ENST00000490416 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.24□□□□□ -1.41
NF1-214ENST00000490416 ABHD15Q6UXT9 468 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 LRRC55Q6ZSA7 311 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 UBR7Q8N806 425 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 CLRN3Q8NCR9 226 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 SLC46A2Q9BY10 475 aa6.24□□□□□ -1.41
NF1-214ENST00000490416 DMRT1Q9Y5R6 373 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms