RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 LDHAP00338 332 aaKnown RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PRKCBP05771 671 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PFKFB1P16118 471 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 ATF7P17544 494 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 ARF4P18085 180 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PTMSP20962 102 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 GARTP22102 1010 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 DNAJB2P25686 324 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 GRM5P41594 1212 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 SYKP43405 635 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PEX3P56589 373 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 CHMP4BP1P59074 171 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PLCB3Q01970 1234 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 MCL1Q07820 350 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 DSC1Q08554 894 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 STRN3Q13033 797 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PRPF4BQ13523 1007 aaKnown RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 MCM6Q14566 821 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 COL19A1Q14993 1142 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 UBXN11Q5T124 520 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 L1TD1Q5T7N2 865 aaKnown RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 FAM102BQ5T8I3 360 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 MPZL3Q6UWV2 235 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 ALKAL1Q6UXT8 129 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 KRBA2Q6ZNG9 492 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 EPM2AIP1Q7L775 607 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 OTOP2Q7RTS6 562 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 HAUS6Q7Z4H7 955 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 DEFB128Q7Z7B8 93 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 SLC9A9Q8IVB4 645 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 FAM178BQ8IXR5 827 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 TRIML1Q8N9V2 468 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 ZNF507Q8TCN5 953 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 BSNDQ8WZ55 320 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 TIFAQ96CG3 184 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 NLRP4Q96MN2 994 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 SCLT1Q96NL6 688 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 GBP4Q96PP9 640 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 ACO2Q99798 780 aaKnown RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 ADAM2Q99965 735 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 TMEM175Q9BSA9 504 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PBX4Q9BYU1 374 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 FAM124BQ9H5Z6 455 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 MINDY3Q9H8M7 445 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 AAASQ9NRG9 546 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 TOPORSQ9NS56 1045 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-223ENST00000480525 FOXD4L1Q9NU39 408 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 RMND1Q9NWS8 449 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 DERAQ9Y315 318 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PCDHB7Q9Y5E2 793 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 IRAK3Q9Y616 596 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 PLXNA4Q9HCM2 1894 aa5.59□□□□□ -1.51
HDAC6-223ENST00000480525 A0A0B4J269 797 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 GOLGA6L4A6NEF3 574 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 GOLGA6L22H0YM25 854 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 POLR2DO15514 142 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 NCK2O43639 380 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TLL1O43897 1013 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 FAM189A1O60320 539 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF202O95125 648 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 EFEMP2O95967 443 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 SRGAP2CP0DJJ0 459 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 ACRP10323 421 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 KCNE1P15382 129 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 LAG3P18627 525 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 CYP3A5P20815 502 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 DEFB103AP81534 67 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 CEBPZQ03701 1054 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 DPYDQ12882 1025 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 NFX1Q12986 1120 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 GRIK3Q13003 919 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 SNW1Q13573 536 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 NOLC1Q14978 699 aaKnown RBP eCLIP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TCTN1Q2MV58 587 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF697Q5TEC3 545 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 ATF7IP2Q5U623 682 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TWF2Q6IBS0 349 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 RTL10Q7L3V2 364 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TAS1R3Q7RTX0 852 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 RNF168Q8IYW5 571 aaPredicted RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 SMG8Q8ND04 991 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 SPATA18Q8TC71 538 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 CCDC47Q96A33 483 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 FAXDC2Q96IV6 333 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 FBXL18Q96ME1 805 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 UROC1Q96N76 676 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 UIMC1Q96RL1 719 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TGS1Q96RS0 853 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 C11orf84Q9BUA3 381 aaPredicted RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 OXCT2Q9BYC2 517 aaPredicted RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 PDZD7Q9H5P4 517 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 ASB7Q9H672 318 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 RSAD1Q9HA92 442 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 SLC28A3Q9HAS3 691 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 GPRC5CQ9NQ84 441 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TSHZ2Q9NRE2 1034 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 RNF19AQ9NV58 838 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms