RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ORC2Q13416 577 aaPredicted RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 PRKG1Q13976 671 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 EFR3AQ14156 821 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 SYTL3Q4VX76 610 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ZNF366Q8N895 744 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PJA1Q8NG27 643 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 UCMAQ8WVF2 138 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 STARD8Q92502 1023 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 KCNN2Q9H2S1 579 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 LRRC4Q9HBW1 653 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 NLRC4Q9NPP4 1024 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 GUCA1BQ9UMX6 200 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 RNASEH1O60930 286 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 CALB1P05937 261 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PIK3CAP42336 1068 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 IFNAR2P48551 515 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 RGS6P49758 472 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 SPANXN2Q5MJ10 180 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 BTBD8Q5XKL5 378 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 TRIM48Q8IWZ4 208 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 OSCARQ8IYS5 282 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CDK20Q8IZL9 346 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 RP9Q8TA86 221 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 DNAJC1Q96KC8 554 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 ADA2Q9NZK5 511 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 MYO1AQ9UBC5 1043 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ZNF711Q9Y462 761 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 A0A0G2JMP0 313 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 MEFVO15553 781 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 PJA2O43164 708 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 COBLO75128 1261 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SERPING1P05155 500 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 P4HBP07237 508 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 PDE4DQ08499 809 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 S100A7AQ86SG5 101 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 IFNL3Q8IZI9 196 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 MYRIPQ8NFW9 859 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 OR4M2Q8NGB6 313 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 RUBCNQ92622 972 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 FAM129BQ96TA1 746 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ELAC2Q9BQ52 826 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 ALG1Q9BT22 464 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CNGB3Q9NQW8 809 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CCDC87Q9NVE4 849 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 CROCCQ5TZA2 2017 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SYNRGQ9UMZ2 1314 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 M0R129 80 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 PRODHO43272 600 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 HOXC6P09630 235 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 RGS4P49798 205 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TAP1Q03518 808 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ARHGEF16Q5VV41 709 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 MREGQ8N565 214 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 KCNB2Q92953 911 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 DCPSQ96C86 337 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 ANO3Q9BYT9 981 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 OSBPL8Q9BZF1 889 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TBK1Q9UHD2 729 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SLC25A13Q9UJS0 675 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 AP4S1Q9Y587 144 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ITIH6Q6UXX5 1313 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 FAM92AA1XBS5 289 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SIN3BO75182 1162 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SPARCP09486 303 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TPP2P29144 1249 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 PUDPQ08623 228 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 NCAPHQ15003 741 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 KNOP1Q1ED39 458 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 RAB11FIP2Q7L804 512 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SCYL3Q8IZE3 742 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 ATL2Q8NHH9 583 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 EXOC6Q8TAG9 804 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 GATAD2BQ8WXI9 593 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 IRX2Q9BZI1 471 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 SPRTNQ9H040 489 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 SERHL2Q9H4I8 314 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SERHLQ9NQF3 203 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 HELLSQ9NRZ9 838 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 APOBEC2Q9Y235 224 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 CFAP69A5D8W1 941 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 C2orf74A8MZ97 194 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 hCG_1984214I3L0E3 225 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ZBTB39O15060 712 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 TRAPPC3O43617 180 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 FGGP02679 453 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 MFAP3P55082 362 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 RWDD2BP57060 319 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 RBM10P98175 930 aaKnown RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 COX10Q12887 443 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ZC2HC1CQ53FD0 456 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 MIS18BP1Q6P0N0 1132 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 PCYOX1LQ8NBM8 494 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 ZNF483Q8TF39 744 aaPredicted RBP5.72□□□□□ -1.49
USF3-202ENST00000478658 SEPT1Q8WYJ6 367 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 AMNQ9BXJ7 453 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 SCUBE2Q9NQ36 999 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 DNAJC11Q9NVH1 559 aa5.72□□□□□ -1.49
USF3-202ENST00000478658 PIPSLA2A3N6 862 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms