RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 FHOD1Q9Y613 1164 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ZNF131P52739 623 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.058e-8■■■■□ 20.8
BRAT1-203ENST00000467558 CDO1Q16878 200 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 MFSD14CQ5VZR4 134 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 KIAA1841Q6NSI8 718 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 ERO1BQ86YB8 467 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 OR6J1Q8NGC5 347 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 SYN2Q92777 582 aaPredicted RBP14.74□□□□□ -0.05
BRAT1-203ENST00000467558 PLAGL2Q9UPG8 496 aa14.74□□□□□ -0.05
BRAT1-203ENST00000467558 RASGRF2O14827 1237 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ZBED1O96006 694 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 OATP04181 439 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ARP10275 920 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 CETPP11597 493 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 NNTQ13423 1086 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ARL13BQ3SXY8 428 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ARHGEF18Q6ZSZ5 1173 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 SPATA4Q8NEY3 305 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 STMN2Q93045 179 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 RUSC1Q9BVN2 902 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 AGPAT3Q9NRZ7 376 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 IP6K2Q9UHH9 426 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 SYNPO2Q9UMS6 1093 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 SNX24Q9Y343 169 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ACTR2P61160 394 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 IER5Q5VY09 327 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 BBS5Q8N3I7 341 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 SMC1BQ8NDV3 1235 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ATRNO75882 1429 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 TADA3O75528 432 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 PSMC1P62191 440 aaKnown RBP14.73□□□□□ -0.05
BRAT1-203ENST00000467558 NAA30Q147X3 362 aaPredicted RBP14.73□□□□□ -0.05
BRAT1-203ENST00000467558 RHOT1Q8IXI2 618 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ARHGAP24Q8N264 748 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 EXOC4Q96A65 974 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 MCUR1Q96AQ8 359 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 ACAP3Q96P50 834 aa14.73□□□□□ -0.05
BRAT1-203ENST00000467558 CIB2O75838 187 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 KRT7P08729 469 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CHRNA3P32297 505 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 RASSF2P50749 326 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 GALCP54803 685 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 ATP11AP98196 1134 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 IL9RQ01113 521 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 NAB2Q15742 525 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 WDR72Q3MJ13 1102 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 RNF139Q8WU17 664 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 HEMGNQ9BXL5 484 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 DDX47Q9H0S4 455 aaKnown RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 KCNQ5Q9NR82 932 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 PACSIN2Q9UNF0 486 aaPredicted RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 HBP1O60381 514 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 GARSP41250 739 aaKnown RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 ZNF211Q13398 564 aaPredicted RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 COL9A3Q14050 684 aaPredicted RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 NCAPHQ15003 741 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CCL15Q16663 113 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 KLHDC7AQ5VTJ3 777 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 KIF12Q96FN5 646 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 SLITRK6Q9H5Y7 841 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 ERAP1Q9NZ08 941 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CPP00450 1065 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 SRGAP2BP0DMP2 458 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 SDC4P31431 198 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 PSMC4P43686 418 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 PDE1BQ01064 536 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 GIT2Q14161 759 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CDKAL1Q5VV42 579 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CENPUQ71F23 418 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 PPP4R1Q8TF05 950 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 TMEM8AQ9HCN3 771 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 M0QYV0 167 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 PPP6R3Q5H9R7 873 aaPredicted RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 FIGNQ5HY92 759 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 NT5DC1Q5TFE4 455 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 PPFIBP2Q8ND30 876 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 LRRC8CQ8TDW0 803 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 HSPH1Q92598 858 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 MKL1Q969V6 931 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 RILPQ96NA2 401 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 CNOT10Q9H9A5 744 aaKnown RBP14.72□□□□□ -0.05
BRAT1-203ENST00000467558 UVRAGQ9P2Y5 699 aa14.72□□□□□ -0.05
BRAT1-203ENST00000467558 XRN1Q8IZH2 1706 aaKnown RBP14.71□□□□□ -0.05
BRAT1-203ENST00000467558 CACNA1FO60840 1977 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 NFIBO00712 420 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 DYNC1LI2O43237 492 aaPredicted RBP14.71□□□□□ -0.05
BRAT1-203ENST00000467558 HOXD10P28358 340 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 MSH2P43246 934 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 IFNAR2P48551 515 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 SARSP49591 514 aaKnown RBP14.71□□□□□ -0.05
BRAT1-203ENST00000467558 NCOA4Q13772 614 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 ZFPM1Q8IX07 1006 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 DNAAF3Q8N9W5 541 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 PDCD2LQ9BRP1 358 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 HMGB1P1B2RPK0 211 aaPredicted RBP14.71□□□□□ -0.05
BRAT1-203ENST00000467558 SMIM22K7EJ46 135 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 GAS2O43903 313 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms